Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1560 224 1e-53 >seq1560 Length=61984 Score = 224 bits (248), Expect = 1e-53 Identities = 474/702 (68%), Gaps = 14/702 (2%) Strand=Plus/Plus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || ||||| || || | || ||||||| | ||| || |||| | || || || ||| Sbjct 7866 AGGCCAGGGCACTCGTTAGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCAACACGCTTC 7925 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 || || |||||||| ||||||||||| | || ||||| | || | | ||||| ||| Sbjct 7926 ATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGATCGCGGGCACGAATCTCCTCCTTT 7985 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || ||||| | || ||||||||| | | | ||| | |||||||| || | ||| Sbjct 7986 CCGTGGTTCTTCCTCAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAG 8045 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 ||||| | | || || || ||||| || ||||| || | ||| | ||| ||||| || Sbjct 8046 ATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAACGAGCCGTGTTGTTG 8105 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 | || | || ||| |||| ||| ||||| || || || ||||| || | ||||||| Sbjct 8106 AAGACACGCAGCATAGGAACAATGCCATTCGAGGTGCCGTTGGTACCGGCGATATAGGAA 8165 Query 63320 CCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 ||| ||||||| ||| | | ||| ||||| || || || ||||| || ||||| | Sbjct 8166 CCAGTGGCACGGATACGATGGACGTTG--AGACCGATACCGCCAGCCATCTTGGAGATCA 8223 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 || || || | ||||||||||||||||| ||||| |||||| |||||| || | Sbjct 8224 TGGCACAGGTCTTGAGGGTATCATAGATGCCCTCGATACTGTCATCCTTCATGTCAACCA 8283 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 | || || |||| ||| | || || || || || | || || || |||| Sbjct 8284 GGAAGCATGATGACAATTGAGCCTGCGGTGTGCCGGCGTTGAAGAGCGTCGGGGACGCGT 8343 Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT----AGCTGAGTCTATATC- 63552 | || || |||| || | || ||||| ||||| || ||| | | | | || Sbjct 8344 GTGTGAAGAATTTGCTGGACATAAGGTTGTAGGTCTCGATGACACGCTCAATGT-TGTCA 8402 Query 63553 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 63612 || | || ||||| || |||||||| | ||||||||| || || ||||| ||||| Sbjct 8403 CCCCAG----ATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCAACAATCTT 8458 Query 63613 GTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 63672 | ||| | || | | ||| || | || | || || || |||||||| | ||| Sbjct 8459 GCCGTTGAGCTTGAGAAGGTAAGACCTCTCGAGGGTCTTGAAGCCAAAATATTGGTAGTT 8518 Query 63673 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714 ||||| || || || | |||| | |||| ||| | ||||| Sbjct 8519 GAAGTCACGATCATAGACAATAGCTGAGTCGAGATCCTCCTT 8560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633614606801600