Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1400 123 5e-23 >seq1400 Length=65033 Score = 123 bits (136), Expect = 5e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 280152 TCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATC 280211 ||| || ||| || |||| |||||||| ||||| ||||| || |||||||| || ||| Sbjct 20703 TCTCTGGGCTCCCGTATTGCCGTCATTGGTCCCAACGGTGCCGGCAAGTCTACTCTTATC 20762 Query 280212 AAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATG 280271 || ||||||||||| ||| | |||||| || | | |||| ||||| Sbjct 20763 AACGTCCTGACTGGTGAGCTCATTCCCACTGCTGGTGAGATCTACCAGCACGAGAACATC 20822 Query 280272 CGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACT 280331 || || || ||| || |||||||||||| ||||||||| |||||| |||||| |||| Sbjct 20823 CGTATCGCCTACATCAAGCAGCACGCTTTCGCCCACATCGATAACCACTTGGACAAGACT 20882 Query 280332 CCTAACCAATACATTCAGTGGCG 280354 ||| | | ||||| |||||||| Sbjct 20883 CCTTCCGAGTACATCCAGTGGCG 20905 Score = 109 bits (120), Expect = 1e-18 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || ||||| ||||| |||| |||||||||||| || |||| |||||||| || ||| Sbjct 19896 GGAGAGGACCTGTGCAACTGCACTTTCTCGCTCGCCTACGGTGCCAAGATTCTTCTCAAC 19955 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| ||| ||||||||||| | || || ||||| ||| ||||| || | Sbjct 19956 CAGACCCACCTTCGTCTCAAGCGTGGCCAGCGCTACGGTCTTTGCGGCCCCAACGGTTCC 20015 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| |||||| ||||||||||| || | ||| | ||||| || || || ||| Sbjct 20016 GGAAAGTCCACTCTCATGCGCGCCATCAACAATGAGCAGGTTGAAGGCTTCCCCAA-GCA 20074 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 ||||| | ||| |||| || ||||||||| | ||||| Sbjct 20075 GAACGAGGTCAAGACCGTGTTCGTCGAGCACGACCTGGACTC 20116 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | ||||||||| | ||| | | ||||| ||||| |||||||| ||||| | Sbjct 21268 CCAACTTCGGTCTGGACGCTGAGCTGGTTTCCCACTCGCGCATGCGCGGTCTGTCTGGTG 21327 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 | ||| ||||| | ||| | | || |||| |||||| | |||||| ||||||| Sbjct 21328 GTCAGCGTGTCAAGGTCGTCCTTGCCGCCTGCTC-GTGGCAGCGTCCTCACTTGATCGTC 21386 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || ||||||||||||||||| ||||||| || Sbjct 21387 CTGGACGAGCCTACCAACTACTTGGACCGTGA 21418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027807880526836