Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1560 405 1e-107 seq2102 206 5e-48 >seq1560 Length=61984 Score = 405 bits (448), Expect = 1e-107 Identities = 1226/1873 (65%), Gaps = 73/1873 (4%) Strand=Plus/Plus Query 243743 AACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCC 243801 ||||| | ||| |||| |||| |||| || | |||||||||||| ||||||||||| || Sbjct 6690 AACTGAATCGGTTGCG-CGGCTGCCTGCGTTCGCAGGTAGTACATACCGGTCTTGAGACC 6748 Query 243802 ACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTC 243861 | |||| | || |||||| | || | ||| ||| | ||||||| Sbjct 6749 AAGCTTCCAGCCTGTGAAGTGCATCGAGGTGATCTTGCCCATGGT------TGGGTCG-- 6800 Query 243862 CTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGC 243921 | || || |||||| |||||| ||| || | ||||| | || || || || Sbjct 6801 ----CGCATGTGGATGTTGAGCGACTGGGACTGATCAATGAAGGCACCACGGTCAGCAGC 6856 Query 243922 CATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT 243980 ||| | || ||| | ||| |||||||| || | |||||||||| |||| | Sbjct 6857 CATCTGAACGACGGTACG-CTGCGATATCTCCCACACAGTCTTGTAGAGCTTCTTGGTAT 6915 Query 243981 GCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCA 244040 ||| |||| | | |||||||| | ||||| | | |||||| || | || Sbjct 6916 CCTCAGGGATGCTGGCAATGTTCTGAATGGAGCCTCCCTCGGCGATGATGCGGTTCTTCA 6975 Query 244041 TGTTATCGTTCCACAGGCCCAAGCGCT-CCAGCGCCTCGACCAGGTGCCTGTTCACCACC 244099 ||| ||| ||||| || |||| | ||| ||| || || ||| || ||| Sbjct 6976 TGTCATCCGACCACAAACC-AAGCTCGACCAAATCCTTGAGCAACCAAGGGTTGACAACC 7034 Query 244100 TGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTC 244159 || ||||| || | ||||| || |||||||||| |||| || ||||||| || | Sbjct 7035 TGGAACTCGCCGGCAAGCACACGACGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCAC 7094 Query 244160 TCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTG 244219 || ||||||| || || || | ||||| || ||||||||||| | || |||| ||| Sbjct 7095 TCATTGTTGCCAAGGATTTGTGAGGTGCTAGCTGTCGGCATGGGGGCAACAAGCAAGCTG 7154 Query 244220 TTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAG 244279 || | || || || || |||| | |||| ||| ||||||||| | Sbjct 7155 TTGCGGACACCATGTTCCTTGATGTTGGCCTTGAGGGCGTCCCAGTCCCA---------G 7205 Query 244280 AGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTG 244339 ||||| | | |||| | ||||||||| |||| || | |||| || || | Sbjct 7206 AGGTCGGAGGGCTTGACGTTCCACATGTCGTACTGGAGAATGCCCTGTGAAACAGGAGAG 7265 Query 244340 CCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTCGAGGGC 244398 || ||||| |||| |||| ||| | ||| |||||||| || | ||| ||| | Sbjct 7266 CCTTCGTATGTCGAGTAGACACCCTGCTCCTGTGCCAGCTTGCAAGAGGCAGTCAAGG-C 7324 Query 244399 GGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT--G 244456 |||| ||| |||||||| |||||| ||||||||| || ||||||| | | || | Sbjct 7325 AGCGTGGTAAATGGTCTCAAAGATCTTCTTGTTCAGCTCACGGGCCT--CAGGAGACTCG 7382 Query 244457 AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGT 244516 || || | | | | ||| | || ||||| ||||| || || | ||||| || Sbjct 7383 AAAGGCAGACGGAGAGCGAGGAAAGCATCAGCCAGACCCTGTACACCCAGACCGATAGGC 7442 Query 244517 CTGTGTCGCTTGTTGGAGCG-CATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCAC 244575 ||||| ||| ||||| | | || || | || |||||||| ||||| ||||||| | Sbjct 7443 CTGTGGCGCATGTTGCTGTTACGTGCCTCCTGG-ACGGGGTAGAAGTTAACGTCGATGAT 7501 Query 244576 CTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTC 244635 |||||||||||| || | | | ||| ||| || || ||||||||| || Sbjct 7502 CTTGTTGAGGTTACGAACAACGACTTGAGTGACCTCGTGGAGTTTCTCAAAGTCGTAGTC 7561 Query 244636 GTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTT 244695 | ||| | |||| || ||||||| ||||| | || ||||| Sbjct 7562 GC------CCTTG----TGGTAGTCG--ACAAACTGAGGCAGGGCCAGAGAAGCAAGGTT 7609 Query 244696 GCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCA 244755 ||| ||||| ||||| || | | | ||||| | ||||| ||||| ||||| || Sbjct 7610 GCATACGGCAACCTCGTCAGGGGCAGAGTACTCCATGATCTCTGTGCAAAGGTTGGAGCT 7669 Query 244756 CTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCAT 244815 ||| || ||||||| || || ||| |||| ||||||| ||||||||| | ||| Sbjct 7670 GCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAACAT 7729 Query 244816 GAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTT 244875 ||| || || |||||| ||| || | || | | | |||||| | | ||||| Sbjct 7730 GAACGGGTTGCCAGTCTCGGTCTGAGCCTCCAGAATGGAATACCAGAGCTTCTGGGCCTT 7789 Query 244876 GACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGG 244935 || ||| ||||| ||||||| | |||||| |||||| ||||||||||| Sbjct 7790 GATAGTCTTGCGACCCTTGCCGGCCTGCTCGTACTTCTCGTACAGAGCCTCGAACTCATC 7849 Query 244936 GCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCC 244995 || || || | ||||| |||||| |||||||| ||| |||| |||||| Sbjct 7850 ACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTAGGGCACATCAGAGTCCAGTCGCCGTT 7909 Query 244996 GTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGT 245055 | || || | || |||||| || || |||||||| || || |||| || || | || Sbjct 7910 CTTCTCAACACGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGATCGCGGGC 7969 Query 245056 CCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTG 245115 | ||| ||| || |||||||||||| || | || || ||||| || |||| Sbjct 7970 ACGAATCTCCTCCTTTCCGTGGTTCTTCCTCAGGTCGAGGAACTCGAAGACATCTGCGTG 8029 Query 245116 CCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCAT 245175 ||| ||||| | ||||| || | ||| ||||| ||||||||||| |||||||| | Sbjct 8030 CCACGGCTCAAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGA---- 8085 Query 245176 CCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGT 245231 | | ||||| |||||||| ||||| |||| || ||||| || ||| ||||| Sbjct 8086 CGTAACGAGCCGTGTTGTTGAAGACACGCAGCATAGGAACAATGCCATTCGAGGTGCCGT 8145 Query 245232 TGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----ATGCCTAGT 245287 |||| || ||| |||| || || | | || | | ||||||| | || | Sbjct 8146 TGGTACCGGCGATATAGGAACCAGTGGCAC---GGATAC-GATGGACGTTGAGACCGATA 8201 Query 245288 CCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATG 245347 ||||| || ||||||||| | ||| ||| |||||| ||| || |||||||| || Sbjct 8202 CCGCCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTATCATAGATGCCCTCGATA 8261 Query 245348 CTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAG 245407 ||||| |||||||| | ||| ||||| || |||| || | || || ||| | | Sbjct 8262 CTGTCATCCTTCATGTCAACCAGGAAGCATGATGACAATTGAGCCTGCGGTGTGCCGGCG 8321 Query 245408 TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGG 245467 ||||| || || ||| ||||| || ||| | ||| || | | ||| |||| | Sbjct 8322 TTGAAGAGCGTCGGGGACGCGTGTGTGAAGAATTTGCTGGACATAAGGTTGTAGGTCTCG 8381 Query 245468 AGCAGAGCGTCGATGTTGTCGCCGTGGAT--CTGCAGGGCGCACCTCATGAGGGTGTGCT 245525 | | | || |||||||| || ||| || || || | ||||| |||||| Sbjct 8382 ATGACACGCTCAATGTTGTCACCCCAGATACCTACA--GCAACACGCATGATCATGTGCT 8439 Query 245526 GGGGCGTCT---CGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCT 245582 | ||| ||| | || || | | | |||||| | ||| || | |||||| |||| Sbjct 8440 GTGGCCTCTCAACAATCTTGCCGTTGAG---CTTGAGAAGGTAAGACCTCTCGAGGGTCT 8496 Query 245583 TGAACCCAAAGTA 245595 |||| ||||| || Sbjct 8497 TGAAGCCAAAATA 8509 >seq2102 Length=47513 Score = 206 bits (228), Expect = 5e-48 Identities = 361/516 (70%), Gaps = 11/516 (2%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691 ||||||||| |||||||| |||||||| || | |||||| | | | || | | || Sbjct 28508 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATC-ACTGACAAGAAGTCGAC 28566 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | | || || || || | | ||||||||||||||||||| || || || Sbjct 28567 ATTTGCCACGCGCCTTGTCGCTTTCGCTGTCGTCGAGGGCATCTTCTTCAGCGGTGCTTT 28626 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 |||||||||||||||||||||| || | | ||||||||| || || ||||| ||||| Sbjct 28627 CGCCTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGCCTGACTTTCTCAAACGA 28686 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 |||||| | | ||||| || || || | ||||||||||| |||||||||||| | Sbjct 28687 GCTCATCTCCCGTGACGAAGGCCTCCACACCGACTTTGCCTGTCTCCTGTTCTCG---CT 28743 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 ||| | ||| |||| ||||| |||| || || | || || || |||| Sbjct 28744 CCTGAACAACAGGCCCAGCAAGGATATTGTCCAGGAGATTGTTGTCGACGCTGTCAAGAT 28803 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991 ||| | |||||||| || || | ||||| |||| | ||||||||| | |||| Sbjct 28804 TGAGCAAGAGTTCCTTACAGAGGCTTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACCT 28863 Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGAC-CATCTCCTGT-GCCAGATGGGTCTC-AG 43048 ||| ||||||| ||| ||||| ||| | || ||| ||| | || | || Sbjct 28864 TATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCC--CTCGGAAACGAG 28921 Query 43049 CCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAA 43108 | ||||| | | | ||| |||||||| ||||||||||| || ||| ||||| Sbjct 28922 AAG-GTCTACCGCTCCACCAACCCATTCGACTTCATGGAGAACATTTCACTGGGTGGCAA 28980 Query 43109 GACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||||| ||||||||||| || | ||| ||||| Sbjct 28981 GACCAACTTCTTCGAGAAGCGTGTAGGCGAGTACCA 29016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944313277888960