Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2143 125 2e-23 seq1434 122 2e-22 seq577 91.5 3e-13 seq215 89.7 1e-12 >seq2143 Length=14442 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||||| | |||||| || || || || || ||||| ||||| Sbjct 10110 TCCTTTTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCCAACTGCTTTCCAGCGAAA 10051 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||||| |||||| |||||||| || || || || || | ||| ||| Sbjct 10050 ATCAATCGCTGTTGG---TCTGGGGGGATTCCTTCCTTGTCTTGAATCTTGGATTTAACG 9994 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || ||| ||||| || | |||||| ||||| || |||| ||||||| Sbjct 9993 TTGTCGATTGTGTCTGACGACTCTACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTG 9934 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 9933 ACGAAGATCTGCAT 9920 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||||||||| | || ||||| || | || || || || || || || |||| Sbjct 9694 CATG-CCACCGCGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTGTAGT 9636 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || || || || || || | ||| || || || ||||| ||||||||||| Sbjct 9635 CGGAAAGAGTCCGGCCATCCTCAAGTTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCGG 9576 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 || || || || || ||||| || |||| || ||||| || || | |||||| || | Sbjct 9575 GAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACT 9516 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGT 288449 | || ||||| ||||| ||||| || || Sbjct 9515 CCACCTCGAGGGTGATGGTCTTGCCAGT 9488 Score = 104 bits (114), Expect = 6e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || || || || | ||| || ||||| | || || || |||||||| ||||| Sbjct 10377 TGGCCGCCACGAAGACGAAGCACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCA 10318 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | | || || || || || | || || || |||||||||| |||||||| | Sbjct 10317 GACAAAGTCCGGCCATCCTCCAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGC 10258 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || || || || || | ||| ||||| || || | ||| |||||| Sbjct 10257 GGAATACCCTCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATCGTGTCGGACGATTCA 10198 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || || || ||||| |||||||||||||| || ||||| Sbjct 10197 ACCTCGAGTGTAATTGTTTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 10148 >seq1434 Length=58724 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | ||||| || || ||||| || ||||||| Sbjct 22714 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 22773 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||| || | || || || || ||||||| ||||| || ||| Sbjct 22774 AGGGTCCTGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 22833 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || || || || || | ||||||||| || || Sbjct 22834 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCGCTCGACTCCACC 22893 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 || || ||||| ||||| || || || ||||||||||| |||||||| || Sbjct 22894 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 22943 >seq577 Length=12318 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/179 (72%), Gaps = 8/179 (4%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| || ||||| ||||| || | || || || |||||||| Sbjct 6021 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATA 6080 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 ||||||||||| | |||||||| || || |||||||| ||| || ||| Sbjct 6081 AGACGCTGTTGGTCAGGGGGGATTCCCTCCTTGTCCTGGAT-----CTTGGAC---TTCG 6132 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | || || || || || || ||||| ||||| || ||||||||||| ||||| Sbjct 6133 ATCGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 6191 >seq215 Length=68854 Score = 89.7 bits (98), Expect = 1e-12 Identities = 191/280 (68%), Gaps = 4/280 (1%) Strand=Plus/Plus Query 325970 GGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAGCTAT-G 326028 || |||||||||| || ||||| | || || | || ||| ||| |||| || | | Sbjct 12588 GGAGTGATGAACTCCTGGAAGAAGTCGGGGATCTGCAGCAGAGAAGG-AAACTGCACTTG 12646 Query 326029 GAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGAT 326088 || ||||| |||| |||||| || ||| ||||||| |||| || | |||||| Sbjct 12647 GAGGAAGTTGATGAGGAGACCCTTGATATGACTTCCGTCGTGATCCTGATCAGCCATGAT 12706 Query 326089 CATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCG-GTTTGAAGGC 326147 ||||| |||||| || ||||| |||||| | ||||| | | | ||| |||| Sbjct 12707 CATCAAATGACCATATCGAAGTCCCTTGGTGTCTGTATACACCTGCTTGTGCTTG-AGGC 12765 Query 326148 CGAGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACGGATGCAT 326207 | || | || |||| | |||||| | ||||||| ||| | | |||||||| Sbjct 12766 CCAGGAACTGCTTGATATTTTGGATTTCCTTGTTCTTCAGGATCTGATCTATGGATGCAT 12825 Query 326208 CGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCC 326247 | || || |||| | ||| |||||||| || ||||| || Sbjct 12826 CTCGCACATTCAGCATTTTACCACGAAGGGGAAACACGCC 12865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179621208948888