Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq2143 127 2e-24 seq1434 114 1e-20 >seq2143 Length=14442 Score = 127 bits (140), Expect = 2e-24 Identities = 162/218 (74%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||| | ||||| || |||||| || |||||||| |||| || |||||| | Sbjct 10363 ACGAAGCACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAAAGTCCGGCC 10304 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||||||||| ||||| || | ||||| ||||| | || | | |||||| Sbjct 10303 ATCCTCCAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGGAATACCCTCCTT 10244 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTG 42170 ||| ||| | || | ||||| ||| | | | ||||||| |||||| || |||| || Sbjct 10243 GTCT-TGAATCTTGGATTTGA-CGTTGTCGATCGTGTCGGACGATTCAACCTCGAGTGTA 10186 Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||||||| || || ||||| || ||||||||||| Sbjct 10185 ATTGTTTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 10148 Score = 104 bits (114), Expect = 3e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | ||| | |||| |||| || |||||||||||| ||||| || | Sbjct 10147 ACCTCCACGCAGACGGAGGACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGA 10088 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || ||| | || || | |||||| |||||||| || | |||||| ||||| | || Sbjct 10087 CAACGTGCGCCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGG 10028 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | | ||||||| | ||| | || | || | ||| | | | ||||| ||| || | Sbjct 10027 GATTCCTTCCTTGT-CTTGAATCTTGGATTTAACGTTGTCGATTGTGTCTGACGACTCTA 9969 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | ||||||||| |||||||| | ||||| || ||||| ||||| Sbjct 9968 CCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 9920 >seq1434 Length=58724 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||| | || | ||||||||||| || || ||||| || | ||| |||| | Sbjct 22725 ACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCC 22784 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || |||||||| || || || || | ||||||||||| | || | | |||||| Sbjct 22785 GTCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTT 22844 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 |||| ||| || |||| | | | || |||||||| ||||| || | ||||| Sbjct 22845 GTCCTGGATCTTGGACTTGACATTGTCGATGGTATCGCTCGACTCCACCTCAAGGGTGAT 22904 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||||||| || ||||| || ||||| ||||| Sbjct 22905 AGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 22940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543197888808640