Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2143 96.9 3e-15 >seq2143 Length=14442 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || || | ||| || || |||||||||||||| || | Sbjct 10147 ACCTCCACGCAGACGGAGGACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGA 10088 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || || | |||||| || || |||| | ||||| ||||| || || Sbjct 10087 CAACGTGCGCCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGG 10028 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||||| || ||||| || || || || || | ||| || | || || Sbjct 10027 GATTCCTTCCTTGTCTTGAATCTTGGATTTAACGTTGTCGATTGTGTCTGACGACTCTAC 9968 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| |||||||| || ||||| || ||||| Sbjct 9967 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 9920 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 ||| || ||||||||||| || | | || || |||| |||||||||||||| || | Sbjct 9883 TTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 9824 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAAC 64371 |||||| || || ||||| || ||||| || || || ||||| || || ||| ||| Sbjct 9823 AATGAGACGTTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGGATCTTCGACTTCACATT 9764 Query 64372 CTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTAC 64431 || | || || || || || || | ||| | ||||| || || | ||||| || Sbjct 9763 GTCGATGGTGTCCGAGGACTCGACCTCCAGAGTAATCGTCTTACCCGTGAGGGTTTTGAC 9704 Query 64432 GAAAATTTGCAT 64443 |||||| ||||| Sbjct 9703 GAAAATCTGCAT 9692 Score = 86.0 bits (94), Expect = 6e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || ||||||||||| || | | || || | || ||||| |||||||||||| | Sbjct 9654 TCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCATCCTCAAGTTGCTTGCCGGCAAAG 9595 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| ||||| |||||||||||||| || || || || || || || ||| || Sbjct 9594 ATGAGACGCTGTTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTG 9535 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 || | ||||| | | ||||| || | || | ||||||||| || Sbjct 9534 TCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT 9488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499631084750240