Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1560 288 1e-72 >seq1560 Length=61984 Score = 288 bits (318), Expect = 1e-72 Identities = 986/1504 (66%), Gaps = 66/1504 (4%) Strand=Plus/Minus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-G 93954 ||||||| || |||||||| || || ||| | | || |||| || || |||||| | | Sbjct 8337 CCCCGACGCTCTTCAACGCCGGCACACCGCAGGCTCAATTGTCATCATGCTTCCTGGTTG 8278 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 || | |||| ||| ||| || || | || | ||||||| |||||| | ||| Sbjct 8277 AC-ATGAAGGATGACAGTATCGAGGGCATCTATGATACCCTCAAGACCTGTGCCATGATC 8219 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCT 94072 || || || || || ||||| ||| ||||| |||| ||||||| ||||||| Sbjct 8218 TCCAAGATGGCTGGCGGTATCGGTCTCAACGTCCAT--CGTATCCGTGCCACTGGTTCCT 8161 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 | ||| ||||||||| |||||||| || ||| | || |||||||| || |||||||||| Sbjct 8160 ATATCGCCGGTACCAACGGCACCTCGAATGGCATTGTTCCTATGCTGCGTGTCTTCAACA 8101 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || |||| || ||||| ||||||||||| | | | ||| | || || |||| | Sbjct 8100 ACACGGCTCGTTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATCTACC 8041 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | ||||| |||||||| || || | ||| |||||||| | ||||||||||| || | Sbjct 8040 TTGAGCCGTGGCACGCAGATGTCTTCGAGTTCCTCGACCTGAGGAAGAACCACGGAAAGG 7981 Query 94253 ATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 | ||||| | ||| | || || ||| |||||| ||| | || || || || |||| Sbjct 7980 A---GGAGATTCGTGCCCGCGATCTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGA 7924 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 | || || ||||| ||| || ||||| ||| | || || || || || || || || Sbjct 7923 AGCGTGTTGAGAAGAACGGCGACTGGACTCTGATGTGCCCTAACGAGTGCCCTGGCCTCG 7864 Query 94370 CCGACGTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAG---GGC 94425 | ||| | || | | || || || |||| | ||||| |||| ||| Sbjct 7863 CGGACTGCTACGG-TGATGAGTTCGAGGCTCTGTACGAGAAGTACGA---GCAGGCCGGC 7808 Query 94426 AAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTG 94485 |||| | ||| ||| | || |||||| ||| || || |||| | ||| Sbjct 7807 AAGGGTCGCAAGACTATCAAGGCCCAGAAGCTCTGGTATTCCATTCTGGAGGCTCAGACC 7748 Query 94486 GAGACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCA 94544 ||||| || | || | ||| |||| |||||| | ||| |||| |||| ||||||| | Sbjct 7747 GAGACTGGCAACCCGTTCATGTTGTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAA 7689 Query 94545 GCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCC 94604 | |||| || ||| ||||| || || ||||| ||||| | ||||| || | || Sbjct 7688 GAACCTGGGTACTATCCGCAGCTCCAACCTTTGCACAGAGATCATGGAGTACTCTGCCCC 7629 Query 94605 GGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTC-CACTTTCGTGCGAGATG 94663 |||||| |||| || || ||||| | || | |||| | || ||| || ||| | Sbjct 7628 TGACGAGGTTGCCGTATGCAACCTTGCTTCTCTGGCCCTGCCTCAGTTT-GT-CGA-CTA 7572 Query 94664 CCTACA----CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAG- 94718 || ||| || |||| ||| | | || | ||| | ||| ||| Sbjct 7571 CC-ACAAGGGCGACTACGACTTTG-AGAAACTCCACGAGGT----CACT------CAAGT 7524 Query 94719 -GATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGG 94777 | || || | ||||| |||| | | |||||| |||||||||||||||| |||||| Sbjct 7523 CGTTGTTCGT-AACCTCAACAAGATCATCGACGTTAACTTCTACCCCGTCCAGGAGGCAC 7465 Query 94778 AGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGC 94837 ||| ||| || || |||| ||||| | || || |||||| | || || || Sbjct 7464 GTAACAGCAACATGCGCCACAGGCCTATCGGTCTGGGTGTACAGGGTCTGGCTGATGCTT 7405 Query 94838 TGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATAT 94897 | | | |||||||| | ||| ||| || || | |||| ||| || | Sbjct 7404 TCCTCGCTCTCCGTCTGCCTTTCGAGTCTCCTGAGGCCCGTGAGCTGAACAAGAAGATCT 7345 Query 94898 TCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCG 94957 | || | |||||| ||| ||| ||| || | | ||| || | | || Sbjct 7344 TTGAGACCATTTACCACGCTGCCTTGACTGCCTCTTGCAAGCTGG-CACAGGAGCAGGGT 7286 Query 94958 GGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCT 95017 | | || ||| | | | || || || | |||||||||| | |||| |||| | | Sbjct 7285 GTCTACTCGA--CATACGAAGGCTCTCCTGTTTCACAGGGCATTCTCCAGTACGACATGT 7228 Query 95018 GGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAAC 95077 || || |||||||| | || | |||||||| || || || | | | ||| Sbjct 7227 GGAACGTCAAGCCCTCCGACCTCTGGGACTGGGACGCCCTCAAGGCCAACATCAAGGAAC 7168 Query 95078 ACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCC 95137 | ||||| ||| ||||||| ||||||||||| || || ||| | || |||| Sbjct 7167 ATGGTGTCCGCAACAGCTTGCTTGTTGCCCCCATGCCGACAGCTAGCACCTCACAAATCC 7108 Query 95138 TTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCG 95197 |||||||||| |||| ||||| |||| ||| |||||| | ||| | | || ||||| | Sbjct 7107 TTGGCAACAATGAGTGCTTCGAGCCCTACACTTCCAACATCTACCAGCGTCGTGTGCTTG 7048 Query 95198 CCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGT 95255 |||| || |||| || ||||| | || ||| || ||| || ||| | Sbjct 7047 CCGGCGAGTTCCAGGTTGTCAACCCTTGGTTGCTCAAGGATTTG--GTCGAGCTTGGTTT 6990 Query 95256 GTG---GGGTGACAAGGTCAAGAAC--CAACTGCTACGCGCCAACGGCTCCGTCCAGAAC 95310 ||| || ||||| | |||||| || | | || | | |||||| | |||||| Sbjct 6989 GTGGTCGGATGACA---TGAAGAACCGCATCATCGCCGAGGGA--GGCTCCATTCAGAAC 6935 Query 95311 AT--CCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGC 95368 || || || || || ||||| | |||| |||||||||||| ||||||||||| ||| Sbjct 6934 ATTGCCAGC--ATCCCTGAGGATACCAAGAAGCTCTACAAGACTGTGTGGGAGATATCGC 6877 Query 95369 AGCG 95372 |||| Sbjct 6876 AGCG 6873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494709619848160