Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2143 107 2e-18 seq2102 102 8e-17 seq1434 100 3e-16 >seq2143 Length=14442 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 ||||| ||||||||||||||| | ||| || |||||| || || || || | | Sbjct 9882 TCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAA 9823 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTG 138542 || ||||| ||||||||||| || ||||| || ||||| ||| || || | |||| Sbjct 9822 ATGAGACGTTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGGATCTTCGACTTCACATTG 9763 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 | | | |||||| | ||||| ||||| | || | ||| ||||| || || ||||| || Sbjct 9762 T-CGATGGTGTCCGAGGACTCGACCTCCAGAGTAATCGTCTTACCCGTGAGGGTTTTGAC 9704 Query 138603 AAAAATCTGCATG 138615 |||||||||||| Sbjct 9703 GAAAATCTGCATG 9691 Score = 104 bits (114), Expect = 2e-17 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||||||||||||||||||| || || ||| ||||| | || || || | Sbjct 10113 GACTCCTTTTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCCAACTGCTTTCCAGCG 10054 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || | ||||||||||| || || || ||||| ||||| ||| | || | ||||| Sbjct 10053 AAAATCAATCGCTGTTGGTCTGGGGGGATTCCTTCCTTGTC-TTGAATCTTGGATTTAAC 9995 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | |||||| ||||| | ||| | || || || |||| ||| | Sbjct 9994 GTTG-TCGATTGTGTCTGACGACTCTACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCT 9936 Query 138599 TTACAAAAATCTGCATGGCT 138618 | || || ||||||||| || Sbjct 9935 TGACGAAGATCTGCATGCCT 9916 Score = 98.7 bits (108), Expect = 1e-15 Identities = 126/170 (74%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||| | ||| || ||||| ||||| || |||| | | Sbjct 9655 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCATCCTCAAGTTGCTTGCCGGCAAA 9596 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| |||||||||||||| ||||| || || || ||||| ||| | || | || | | Sbjct 9595 GATGAGACGCTGTTGGTCGGGAGGAATGCCCTCCTTGTC-CTGAATCTTCGACTTGACGT 9537 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGT 138590 || || | ||| ||| | ||||||||||||| || | || || ||||| Sbjct 9536 TG-TCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT 9488 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| || | ||| | || | ||| | | |||||||| || || |||||||| Sbjct 10375 GCCGCCACGAAGACGAAGCACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGA 10316 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || ||||| || || ||||| | |||| | ||||||||||| || || Sbjct 10315 CAAAGTCCGGCCATCCTCCAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGG 10256 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| | || | ||| | ||| || | ||||||| ||| || Sbjct 10255 AATACCCTCCTTGTC-TTGAATCTTGGATTTGACGTTG-TCGATCGTGTCGGACGATTCA 10198 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| || | ||||| || || ||||| || || || || ||||| Sbjct 10197 ACCTCGAGTGTAATTGTTTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 10148 >seq2102 Length=47513 Score = 102 bits (112), Expect = 8e-17 Identities = 337/516 (65%), Gaps = 11/516 (2%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCC 52385 || || ||| | ||||| ||||| | ||||| ||| ||||||| | | | | Sbjct 28505 GTCCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACTGACAAGAAGTCG 28564 Query 52386 ACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGC 52445 || | ||| |||| | || || ||||| | ||||||||| | || || ||| || Sbjct 28565 ACATTTGCCACGCGCCTTGTCGCTTTCGCTGTCGTCGAGGGCATCTTCTTCAGCGGT-GC 28623 Query 52446 TTT-GCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAA 52504 ||| ||| ||||||| | | || | | ||| | |||||||||||||| ||| || Sbjct 28624 TTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGCCTGACTTTCTCAAA 28683 Query 52505 CGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGAC 52564 |||| | || || || |||||||| || ||||| |||||||| || ||| | | | Sbjct 28684 CGAGCTCATCTCCCGTGACGAAGGCCTCCACACCGACTTTGCCTGTCTCCTGTTC---TC 28740 Query 52565 GCGCGTGACCGAAAAATTGGATTCGGACACGATCC-TGAGCATGTTCAAGGAGGCGGTGG 52623 || | ||| | | | ||| | ||| ||| |||| || || || Sbjct 28741 GCTCCTGAACAACAGGCCCAGCAAGGATATTGTCCAGGAGATTGTT-GTCGACGCTGTCA 28799 Query 52624 CTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGC 52683 || || | ||||| |||| | || |||| || || |||||||||||||| Sbjct 28800 AGATTGAGCAAGAGTTCCTTACAGAGGCTTTGCCCTGCGCCCTCCTGGGCATGAACGCCA 28859 Query 52684 AGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGC 52743 | ||| ||||||| |||||||| || || | || | || ||||| | Sbjct 28860 ACCTTATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTCGGAAACG 28919 Query 52744 CAAAGTACTTCAACGCTC--GCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGG 52801 ||| || | ||||| ||| || || || || ||| | |||||||| || | || Sbjct 28920 AGAAGGTCT--ACCGCTCCACCAACCCATTCGACTTCATGGAGAACATTTCACTGGGTGG 28977 Query 52802 CAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||||||||||| ||||||||||| || |||||||| Sbjct 28978 CAAGACCAACTTCTTCGAGAAGCGTGTAGGCGAGTA 29013 >seq1434 Length=58724 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||| || || | ||||||||| || || |||| | | Sbjct 22749 CTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCCGTCCTCGAGCTGCTTGCCGGCAAA 22808 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| | ||||| |||||||| || ||||| || ||||| ||| || || | ||| Sbjct 22809 GATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATT 22868 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||| ||| ||||||||||||| | || | || || || || || || || | Sbjct 22869 G-TCGATGGTATCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGA 22927 Query 138602 CAAAAATCTGCATG 138615 | || ||||||||| Sbjct 22928 CGAAGATCTGCATG 22941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496248777597120