Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq2102 125 7e-24 seq2143 107 2e-18 >seq2102 Length=47513 Score = 125 bits (138), Expect = 7e-24 Identities = 344/517 (67%), Gaps = 19/517 (4%) Strand=Plus/Plus Query 47070 CCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACAT---TGAAAACGAAAACGTC 47126 |||||| | |||| |||||||| ||||| ||| || || ||| || ||| || | Sbjct 28508 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACTGACAA-GAAGTCGAC 28566 Query 47127 ACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGC 47186 | | ||| || | |||||||||| ||||||||||| |||||||| || || Sbjct 28567 ATTT--GCCACGCGCCTTGTCGCTTTCGCTGTCGTCGAGGGCATCTTCTTCAGCGGT-GC 28623 Query 47187 TTT-GCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAA 47245 ||| || | || || | | || | || | ||||||||||| || || || Sbjct 28624 TTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGCCTGACTTTCTCAAA 28683 Query 47246 CGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACAC 47305 |||||| ||||| | ||||||||||| |||||| |||||||||||||| | | | | Sbjct 28684 CGAGCTCATCTCCCGTGACGAAGGCCTCCACACCGACTTTGCCTGTCTCCTGTTCT-CGC 28742 Query 47306 TAGAGTCGATCAAAAGTTGGA-CGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCG 47364 | | | ||| || | | | | ||| || || ||| ||| || ||| Sbjct 28743 TCCTG---AACAACAGGCCCAGCAAGGATATTGTCCAGGAGATTGTTGTCGACGCTGTCA 28799 Query 47365 CCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGG 47424 |||||| ||||| | | |||||| ||||| | | |||| |||||||| Sbjct 28800 AGATTGAGCAAGAGTTCCTTACAGAGGCTTTGCCCTGCGCCCTCCTGGGCATGAACGCCA 28859 Query 47425 AGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCT---AAAGT 47481 | | |||| ||||||| || |||||||| ||| | || || || || ||| Sbjct 28860 ACCTTATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTCGGAAACG 28919 Query 47482 ATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGG 47541 | ||| | |||| | || || |||||||| || ||| | |||||||| || | | Sbjct 28920 AG---AAGGTCTACCGCTCCACCAACCCATTCGACTTCATGGAGAACATTTCACTGGGTG 28976 Query 47542 GCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 ||||||||||||| ||||||||||| || ||||| || Sbjct 28977 GCAAGACCAACTTCTTCGAGAAGCGTGTAGGCGAGTA 29013 >seq2143 Length=14442 Score = 107 bits (118), Expect = 2e-18 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||| || | ||||||||| |||||||| ||||| ||| || |||||| ||| || Sbjct 10128 ACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCC 10069 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | ||| ||||||||| | ||||||||||| || || || || || || ||||||| | || Sbjct 10068 AACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGGATTCCTTCCTTGT-CTTG 10010 Query 127025 ATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 | | | | || | |||| |||| ||||| | ||| || || | || | || | Sbjct 10009 AATCTTGGATTTAACGTTG-TCGATTGTGTCTGACGACTCTACCTCCAACGTGATGGTCT 9951 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 |||| |||| ||| || || || ||||||||| || Sbjct 9950 TGCCCGTCAAAGTCTTGACGAAGATCTGCATGCCT 9916 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||| | ||| | || ||||| || || |||||||| || || || || ||| || Sbjct 10357 CACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAAAGTCCGGCCATCCTC 10298 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || ||| ||||||| ||||| || || || || || ||||||||||| Sbjct 10297 CAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGGAATACCCTCCTTGTCTTG 10238 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 || || |||| |||| |||| ||||| | || || |||| || | |||| Sbjct 10237 AATCTTGGATTTGACGTTG-TCGATCGTGTCGGACGATTCAACCTCGAGTGTAATTGTTT 10179 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||| ||||| || || || || ||||| Sbjct 10178 TGCCGGTAAGAGTCTTGACGAAGATTTGCAT 10148 Score = 82.4 bits (90), Expect = 7e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||| | || | ||| ||| || ||||| ||||| ||| Sbjct 9690 CCACCGCGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTGTAGTCGGAA 9631 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || || || || || |||| | ||||| || |||||||| Sbjct 9630 AGAGTCCGGCCATCCTCAAGTTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCGGGAGGA 9571 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| || ||| ||||| |||| |||| ||| || || ||| || Sbjct 9570 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTG-TCGATGGTATCGCTAGACTCCAC 9512 Query 127066 TTCGACGGTCACCGTTTTGCCGGT 127089 |||| ||| | || ||||| || Sbjct 9511 CTCGAGGGTGATGGTCTTGCCAGT 9488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475487747503040