Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1560 302 6e-77 seq2102 100 4e-16 seq1456 84.2 3e-11 >seq1560 Length=61984 Score = 302 bits (334), Expect = 6e-77 Identities = 1191/1849 (64%), Gaps = 61/1849 (3%) Strand=Plus/Minus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATG 111605 |||||||| ||||||||||||||| ||||| | | || | || | | Sbjct 8509 TATTTTGGCTTCAAGACCCTCGAGAGGTCTTACCTTCTCAAGCTCAACGGCAAGATTGTT 8450 Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 || | |||||| ||||| ||||||| || || | |||||| || || | ||||| Sbjct 8449 GAGAGGCCACAGCACATGATCATGCGTGTTGCTGTAGGTATCTGGGGTGACAACATTGAG 8390 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACC 111725 ||| | ||||| ||| || |||||| | | |||| ||||| | || || Sbjct 8389 CGTGTCATCGAGACCTACAACCTTATGTCCAGCAAATTCTTCACACACGCGTCCCCGACG 8330 Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785 ||||||||||| || ||||| | ||| |||| || ||||| ||| | ||| Sbjct 8329 CTCTTCAACGCCGGCACACCGCAGGCTCAATTGTCATCATGCTTCCTGGTTGACATGAAG 8270 Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845 || || ||| | ||||| || | || |||| |||||| ||||| ||| | Sbjct 8269 GATGACAGTATCGAGGGCATCTATGATACCCTCAAGACCTGTGCCATGATCTCCAAGATG 8210 Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAG-AG 111903 ||||| |||||||| | || ||||| | || | ||| || || || ||| | | | Sbjct 8209 GCTGGCGGTATCGGTCTCAACGTCCATCGTATCCGTGCC-ACTGGT-TCCTATATCGCCG 8152 Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963 |||| || || || |||| ||| |||| ||||| || || || ||| ||| || | Sbjct 8151 GTACCAACGGCACCTCGAATGGCATTGTTCCTATGCTGCGTGTCTTCAACAACACGGCTC 8092 Query 111964 GCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGC 112017 | || || |||| | ||| ||||| | || | | || |||| ||||||| Sbjct 8091 GTTACGTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTACCTTGAGC 8035 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 | |||||||| ||| || | |||||||| || || | ||||| || | |||||| Sbjct 8034 CGTGGCACGCAGATGTCTTCGAGTTCCTCGACCTGAGGAAGAACCACGGAAAGGAGGAGA 7975 Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 || ||||||||| ||| |||||| ||||| || ||||| ||||||||| | |||| Sbjct 7974 TTCGTGCCCGCGATCTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGTGTTG 7915 Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCG 112197 || ||| ||| | ||| |||| | || || || || || || ||| | || | Sbjct 7914 AGAAGAACGGCGACTGGACTCTGATGTGCCCTAACGAGTGCCCTGGCCTCGCGGACTGCT 7855 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAG------AAAGTCGGGCGA 112251 ||||| ||||| || || || ||| ||||||||| | | | |||| || Sbjct 7854 ACGGTGATGAGTTCGAGGCTCTGTACGAGAAGTACGAGCAGGCCGGCAAGGGTCGCAAGA 7795 Query 112252 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 112311 || | || |||| || | ||| | | ||||| || |||| |||||||||| Sbjct 7794 CTATCAAGG-CCCAGAAGC-----TCTGGTATTCCATTCTGGAGGCTCAGACCGAGACTG 7741 Query 112312 GTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 112371 | | || | ||| | ||||| ||| ||| |||| ||||| || || ||||| ||| Sbjct 7740 GCAACCCGTTCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGG 7681 Query 112372 GTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 112431 || ||| || |||||||| || ||||| ||| |||| | | | | || ||| Sbjct 7680 GTACTATCCGCAGCTCCAACCTTTGCACAGAGATCATGGAGTACTCTGCCCCTGACGAGG 7621 Query 112432 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA 112491 || || || ||||| || || | || || || ||| ||| || | |||| | Sbjct 7620 TTGCCGTATGCAACCTTGCTTCTCTGGCCCTGCCTCAGTTTGTCGA--CTACCACAAGGG 7563 Query 112492 C--ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAG 112549 | | || | ||| ||||||||||| || || || || ||||| |||| Sbjct 7562 CGACTACGACTTTGAGAAACTCCACGAGGTCACTCAAGTCGTTGTTCGTAACCTCAACAA 7503 Query 112550 AGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCG 112609 | || || || || |||||||| || || ||||| || ||| | ||| | Sbjct 7502 GATCATCGACGTTAACTTCTACCCCGTCCAGGAGGCACGTAACAGCAACATGCGCCACAG 7443 Query 112610 TCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGC 112666 || || ||||| ||||| || ||||| || |||| ||| | ||| ||| | | Sbjct 7442 GCCTATCGGTCTGGGTGTACAGGGTCTGGCTGATGCTTTCCTCGCTCTCCGTCTGC---C 7386 Query 112667 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGC 112726 || || || || || || | || | || |||||||| || || ||||| Sbjct 7385 TTTCGAGTCTCCTGAGGCCCGTGAGCTGAACAAGAAGATCTTTGAGACCATTTACCACGC 7326 Query 112727 CGCTCTTGA-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 112785 || ||||| || || || ||||| ||| | ||| || || | || | Sbjct 7325 TGC-CTTGACTGCCTCTTGCAAGCTGGCACAGGAGCAGGGTGTCTACTCGACATACGAAG 7267 Query 112786 GTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTC 112845 | ||||| | |||||| || | || || | || |||||| | | || || | Sbjct 7266 GCTCTCCTGTTTCACAGGGCATTCTCCAGTACGACATGTGGAACGTCAAGCCCTCCGACC 7207 Query 112846 ACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT- 112904 || ||||||||||| ||||||| ||||||||| | ||| | || ||||| ||| Sbjct 7206 TCTGGGACTGGGACGCCCTCAAGGCCAACATCAAGGAACATGGTGTCCGCAACAG-CTTG 7148 Query 112905 -TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 112963 ||| | || || ||||| ||||| |||| |||||||| | || || ||||| ||||| Sbjct 7147 CTTG-TTGCCCCCATGCCGACAGCTAGCACCTCACAAATCCTTGGCAACAATGAGTGCTT 7089 Query 112964 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 113023 || |||||||| | |||||||| | | | | || || || ||||| | |||| Sbjct 7088 CGAGCCCTACACTTCCAACATCTACCAGCGTCGTGTGCTTGCCGGCGAGTTCCAGGTTGT 7029 Query 113024 CAAC---AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA 113080 |||| | ||| |||| || ||| ||||| | ||||| | || ||||| Sbjct 7028 CAACCCTTGGTTGCTCAAGGATTTGGTC---GAGCTTGGTTTGTGGTCGGATGACATGAA 6972 Query 113081 GGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAAT 113140 | | | ||| | | ||| || |||||||| || |||| || || || || | Sbjct 6971 GAACCGCATCATCGCCGAGGGAGGCTCCATTCAGAACATTGCCAGCATCCCTGAGGATAC 6912 Query 113141 TAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGAT-GAAGGAT---GTCATTGACATGG 113196 |||||| | ||| || || ||||| || || | || | ||| || | |||| Sbjct 6911 CAAGAAGCTCTACAAGACTGTGTGGGAGAT----ATCGCAGCGTACCGTCGTTCAGATGG 6856 Query 113197 CCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAG 113254 | || || |||||| ||||||||||| |||| ||| | || | |||| Sbjct 6855 CTGCTGACCGTGGTGCCTTCATTGATC--AGTCCCAGTCGCTCAACATCCACATGCGCGA 6798 Query 113255 TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAA 113313 ||||| ||| |||| || | || |||||| | ||| | |||||| |||||||| | Sbjct 6797 CCCAACCATGGGCAAGATCACCTCGATGCAC-TTCACAGGCTGGAAGCTTGGTCTCAAGA 6739 Query 113314 CGGGGATGTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTT 113362 | || ||||| ||||| ||| | ||||| |||| || |||||||| Sbjct 6738 CCGGTATGTACTACCTGCGAACGCAGGCAGCCGCGCAACCGATTCAGTT 6690 >seq2102 Length=47513 Score = 100 bits (110), Expect = 4e-16 Identities = 160/226 (71%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGTC 102166 ||| || || || | ||||| || || |||||| ||| |||| | ||| | ||||| Sbjct 28504 AGTCCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACTGACAAGAAGTC 28563 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGT-GTTGAGGGTATCTTCTTCTCTG 102225 | | ||||| ||| || |||| || || ||| || ||||| ||||||||| | Sbjct 28564 GA---CATTTGCCACGCGCCTTGTCGCTTTCGC-TGTCGTCGAGGGCATCTTCTTCAGCG 28619 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 || | ||| | | || | |||||||||||||| || | ||||| || || |||| Sbjct 28620 GTGCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGCCTGACTTTCT 28679 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 | |||||||| ||||| |||||||| || |||||| || ||||| Sbjct 28680 CAAACGAGCTCATCTCCCGTGACGAAGGCCTCCACACCGACTTTGC 28725 >seq1456 Length=106862 Score = 84.2 bits (92), Expect = 3e-11 Identities = 174/257 (68%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 16114 ||| || | ||| || || || || ||||||| |||||| || | || ||| || | Sbjct 77416 CTTGCCGATGGCGTCGATTTCGTCGATGAAGATGATGCAGGGGGCGTGTTTGCGCGCCTC 77357 Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 16173 | || || || || ||||| || || |||||||||||||| || || || | || Sbjct 77356 CTTGAACAGGTCACGCACACGAGACGCACCGACACCAACAAACATTTCGACGAACTCTGA 77297 Query 16174 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232 | | || | || |||||| ||| || ||||| || | || ||| || || Sbjct 77296 ACCACTGACGCT--GAAGAAGGGCACACCCGACTCACCGGCCGTAGCCTTGGCCAGGAGC 77239 Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTT 16292 |||||||| || ||||| ||| | | || |||||| |||||||| |||||||| | Sbjct 77238 GTCTTACCTGTTCCTGGAGGACCAGACAAGATGGCACCACGTGGAATTTTGGCGCCCAAT 77179 Query 16293 CCAAAGTATCTCTCAGG 16309 | || | || |||| || Sbjct 77178 CGAACGAATTTCTCCGG 77162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620725360621120