Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2143 111 1e-19 seq1434 82.4 6e-11 >seq2143 Length=14442 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||||| || || ||||| ||||| || || ||| | || |||| || Sbjct 9900 ACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCGTCCTCA 9841 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || || || || ||||| |||| ||||| ||||||||||| Sbjct 9840 AGCTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGG 9781 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | || || | ||| ||||||| |||||||| || Sbjct 9780 ATCTTCGACTTCACATTGTCGATGGTGTCCGAGGACTCGACCTCCAGAGTAATCGTCTTA 9721 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | ||||| || ||||||||||| Sbjct 9720 CCCGTGAGGGTTTTGACGAAAATCTGCAT 9692 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| || ||||| ||| |||||||| ||||| || || | | || | || ||| Sbjct 10128 ACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCC 10069 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 |||||||| || || || |||| ||||||||| || | ||| | || |||||||| | Sbjct 10068 AACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGGATTCCTTCCTTGTCTTGA 10009 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| ||| || | | | ||||||| ||| ||||||| ||| || || || Sbjct 10008 ATCTTGGATTTAACGTTGTCGATTGTGTCTGACGACTCTACCTCCAACGTGATGGTCTTG 9949 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||||||||| || || || |||||||| Sbjct 9948 CCCGTCAAAGTCTTGACGAAGATCTGCAT 9920 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 |||||| | || || | ||| | ||| || || ||| || || |||||||| ||||| Sbjct 10375 GCCGCCACGAAGACGAAGCACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGA 10316 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 | | | || | || |||| ||||||||| || || |||| |||||||| || | || Sbjct 10315 CAAAGTCCGGCCATCCTCCAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGG 10256 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || ||||||||||| |||||| ||| || | | | || |||| || || Sbjct 10255 AATACCCTCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATCGTGTCGGACGATTCAAC 10196 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| | ||||| ||||| || || | ||| || || || || ||||| Sbjct 10195 CTCGAGTGTAATTGTTTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 10148 >seq1434 Length=58724 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||| | || || |||||||| || || || ||||| || || || | | Sbjct 22723 AGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTG 22782 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| |||||||| |||| ||||| || |||| ||| | |||||| Sbjct 22783 CCGTCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCC 22842 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || ||||||||| | || Sbjct 22843 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCGCTCGACTCCACCTCAAGGGTG 22902 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| | || || || || |||||||| Sbjct 22903 ATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 22940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380927404681308