Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq249 82.4 9e-11 >seq249 Length=47432 Score = 82.4 bits (90), Expect = 9e-11 Identities = 203/308 (66%), Gaps = 0/308 (0%) Strand=Plus/Plus Query 139248 GCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCG 139307 || ||||| | ||||| || | |||||| || | ||||| | | | || || || Sbjct 44819 GCGATAGCCTTCAGTCCCTCGGGACCATGGTAAACGGCATACATGACCGCCACGTTGGCC 44878 Query 139308 AGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCT 139367 |||| || || || || |||| ||| || || || || ||||||| ||||||||||| Sbjct 44879 GGCAGGGCCTGGGCAGTACAGACGTTGCTCGTGGCCTTCTCTCTTCGGATATGCTGCTCA 44938 Query 139368 CTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACA 139427 | || || || || |||| || | | || || |||| ||| ||| ||| Sbjct 44939 CGGGTCTGCAGCGCCAATCGAAGGGCCCGGTCACCGCGGCGGTCCTTGGACACACCGACA 44998 Query 139428 ATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGA 139487 | | ||| || ||||| | ||| | ||| || | |||||||| || || || || Sbjct 44999 AGACGGCCGGGAATCTTGCGCTTGTGCTTTTCGGAAACCGCAAAGAAGGCGGCGTGCGGG 45058 Query 139488 CCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATCAAATCCC 139547 || ||| |||| |||| ||| ||||| ||| || || | || || || |||| Sbjct 45059 CCACCGCCACCCAGGGGAACACCCAACCTCTGCGAGCTTCCAAAGGCGATGTCGGCTCCC 45118 Query 139548 CACTCACC 139555 ||||| || Sbjct 45119 CACTCGCC 45126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578982506493920