Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2143 89.7 4e-13 seq1394 86.0 5e-12 >seq2143 Length=14442 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| ||||| || ||||| ||||| || | || ||| | Sbjct 9920 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTAGAGTCGTCA 9979 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || ||| |||||| ||||| ||||| | ||| || ||| Sbjct 9980 GACACAATCGACAACGTTAAATCCAAGATTCAAGACAAGGAAGGAATCCCCCCAGACCAA 10039 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || | |||| || || || ||| ||||||||| | || || | || |||||| Sbjct 10040 CAGCGATTGATTTTCGCTGGAAAGCAGTTGGAGGATGGGCGCACGTTGTCCGACTACAAC 10099 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| || |||||| ||||| |||| | | ||||| || || Sbjct 10100 ATTCAAAAGGAGTCTACGCTGCACCTGGTCCTCCGTCTGCGTGGAGG 10146 >seq1394 Length=147340 Score = 86.0 bits (94), Expect = 5e-12 Identities = 200/297 (67%), Gaps = 6/297 (2%) Strand=Plus/Plus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 ||||| || ||||| ||||| | || | | || | ||||||||| |||||| || Sbjct 92301 GATGACATCTGTCTCGGGGTTCTTGCACTTCTTGCAAAGAACAAACTTGTTGATGAACCC 92360 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 || || |||||| | ||| | | ||||| | ||||||| ||| | || |||| Sbjct 92361 GTCGAGGTAGTCCTGAAGCTTTGCAGCATCGTGAGCTCCGTTGATGATCCAACGGTCGTC 92420 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 | ||| | | || || || || ||||| | || |||||||| | |||| Sbjct 92421 GGCGGGATCAATGTTGGTCTGGGCACCGAGCTCAAAGCCAAAGTACTTGATAAGGTAGGC 92480 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATT-TCGGGCATGTTGACGATGACAGTCTTGATGC 34549 | ||||| | || | || |||| ||| | | |||||||| || |||||||| | Sbjct 92481 TCCAGGACGAGCGAGAGACTGAGCGACGCTCGTG-AGGTTGACGACAACGGTCTTGATTC 92539 Query 34550 CGTTGCCCTTTCCTTCGACCTTGG--CGCAGATGCGCGGCATTTTGTAGCGGTAGAA 34604 |||||||||| || |||| ||||| |||| |||| ||| ||||| || ||||| Sbjct 92540 CGTTGCCCTTACCCTCGATCTTGGTCTGCAG--GCGCTCCATCTTGTAACGATAGAA 92594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412830550810628