Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2143 98.7 8e-16 >seq2143 Length=14442 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| || ||||| ||||| ||| ||| || |||||||| || || | | Sbjct 9918 CCTCCACGGAGACGAAGGACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAGTCGGAA 9859 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || || || || || |||||||| | || | | ||| || ||||| ||| Sbjct 9858 AGAGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCCGGGGGA 9799 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| |||||||| | || || ||| | || | ||||| || || || Sbjct 9798 ATACCCTCCTTGTCTTGGATCTTCGACTTCACATTGTCGATGGTGTCCGAGGACTCGACC 9739 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || || || | |||||| || || |||||||| Sbjct 9738 TCCAGAGTAATCGTCTTACCCGTGAGGGTTTTGACGAAAATCTGCAT 9692 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | || ||| || |||| || ||||| || || ||||||||||| || || | Sbjct 10146 CCTCCACGCAGACGGAGGACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGAC 10087 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || | || || ||||| | ||||||| || || || || || Sbjct 10086 AACGTGCGCCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGG 10027 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || |||||||| ||| || | ||| || | || | ||||| || ||||| Sbjct 10026 ATTCCTTCCTTGTCTTG-AATCTTGGATTTAACGTTGTCGATTGTGTCTGACGACTCTAC 9968 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || || ||||| || || || || || || |||||||| Sbjct 9967 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 9920 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| | ||| || || || || || || || || || || | | || || Sbjct 10363 ACGAAGCACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAAAGTCCGGCC 10304 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || || | ||||| | || || || |||||||||||||| || Sbjct 10303 ATCCTCCAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGGAATACCCTCCTT 10244 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | |||||| | || | ||||| || ||| || || || || | Sbjct 10243 GTCTTG-AATCTTGGATTTGACGTTGTCGATCGTGTCGGACGATTCAACCTCGAGTGTAA 10185 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | |||||||| || | || || || || || ||||| Sbjct 10184 TTGTTTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 10148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385208890089636