Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1560 140 5e-27 seq2102 129 8e-24 seq12 95.1 2e-13 >seq1560 Length=61984 Score = 140 bits (154), Expect = 5e-27 Identities = 206/289 (71%), Gaps = 2/289 (1%) Strand=Plus/Minus Query 259895 ATGTCGCAGCAG-TTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 ||||| ||||| || ||||| ||| | || |||||||| || |||||||| |||| Sbjct 8365 ATGTC-CAGCAAATTCTTCACACACGCGTCCCCGACGCTCTTCAACGCCGGCACACCGCA 8307 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013 | || || || ||||| ||| | |||||||||| || |||||||||||||| Sbjct 8306 GGCTCAATTGTCATCATGCTTCCTGGTTGACATGAAGGATGACAGTATCGAGGGCATCTA 8247 Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073 ||| || |||||| || || | ||||||||| ||| ||||| |||||| | || Sbjct 8246 TGATACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGCGGTATCGGTCTCAACGT 8187 Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133 || | || ||| | || |||| | || || ||||||||| || || ||| | Sbjct 8186 CCATCGTATCCGTGCCACTGGTTCCTATATCGCCGGTACCAACGGCACCTCGAATGGCAT 8127 Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 ||| || ||||| || || || ||| ||||||| || |||||||||||| Sbjct 8126 TGTTCCTATGCTGCGTGTCTTCAACAACACGGCTCGTTACGTCGACCAG 8078 >seq2102 Length=47513 Score = 129 bits (142), Expect = 8e-24 Identities = 139/183 (76%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 1455885 TTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCT 1455944 |||||| |||| | |||||||| || |||||| ||||||||||| |||||| || Sbjct 28222 TTCATCTCGCACATTCTCGCCTTCTT-CGCCGCTTCGGATGGCATCGTCAACGAGAATCT 28280 Query 1455945 GGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCA 1456004 || | ||||| | || ||||| | || ||||| || | || ||||| ||||| Sbjct 28281 GGTTGAGCGCTTCAGCGCCGAAGTCCAGATTCCCGAGGCGCGCTGCTTCTACGGCTTCCA 28340 Query 1456005 GATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAA 1456064 |||| || || ||||||||||| || ||||||||||||||||||||||| ||| |||| Sbjct 28341 GATCATGATGGAGAACATCCACTCCGAGACCTACTCGCTCCTGATCGACACATACATCAA 28400 Query 1456065 GGA 1456067 ||| Sbjct 28401 GGA 28403 Score = 125 bits (138), Expect = 1e-22 Identities = 224/322 (70%), Gaps = 4/322 (1%) Strand=Plus/Plus Query 1456460 GACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACGTGCCCAAG 1456519 |||||||||||||| || | | || | || ||||| ||| | || | | || Sbjct 28718 GACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCCAGCAAGGATATTGTCCAG 28777 Query 1456520 CAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTG 1456579 |||| | ||||| || ||| |||| ||| ||||||| | | ||| | |||| Sbjct 28778 GAGATTGTTGTCGACGCTGTCAAGATTGAGCAAGAGTTCCTTACAGAGGCTTTGCCCTGC 28837 Query 1456580 GCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACC 1456639 || ||| | ||||||||||||| | || ||| ||||||||||| ||| ||||| ||| Sbjct 28838 GCCCTCCTGGGCATGAACGCCAAC-CTTATGAAGCAGTACATTGAGTTT-GTCGCTGACA 28895 Query 1456640 GCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGG 1456699 | || || | || ||||| || ||||| |||||| | ||||||| ||| | Sbjct 28896 GACTTCTTGTCGCCCTCGGAAACG-AGAAGGTCTACCGCTCCACCAACCCATTCGACTTC 28954 Query 1456700 ATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTAC 1456758 |||||| || || || | |||||||||||||| |||||| || || ||||||||| Sbjct 28955 ATGGAGAACATTTCACTGGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTAGGCGAGTAC 29014 Query 1456759 GCCAAGGCCGGCGTCACCGCCA 1456780 |||||||| |||| |||| Sbjct 29015 CAAAAGGCCGGTGTCATGGCCA 29036 Score = 107 bits (118), Expect = 3e-17 Identities = 120/157 (76%), Gaps = 9/157 (6%) Strand=Plus/Plus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCG 1456179 || |||||||||||||| ||| |||||||| ||||| || |||||| |||||| Sbjct 28520 AAGAAGGCCGACTGGGCTCTGAGGTGGATCACTGACAAGAAG----TCGACA-TTTGCCA 28574 Query 1456180 AGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238 ||| || |||| || || | ||||||||||||||| ||| || |||| | ||| Sbjct 28575 CGCGCCTTGTCGCTTTCGCTGTCGTCGAGGGCATCTTCTTCAGCGGTGCTTTCGCCTCCA 28634 Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||| |||||||||||||| ||| | |||||||| || Sbjct 28635 TCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGCCT 28671 >seq12 Length=70778 Score = 95.1 bits (104), Expect = 2e-13 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827 || || ||||| || |||||||||||||||||| | ||||||||| |||| || | ||| Sbjct 59316 GGTGCAGTCGGCGCCCGCACCACCGAGAGCCAGCTCCACCGCGAGCTGGCCTCTGGTCTG 59257 Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA-GCGTGGCGACGGCCCTCGATGC 165886 || | ||| | |||||||| ||| | |||||||||| || |||| |||| |||| || Sbjct 59256 TCGTTCCCCGTCGGCTTCAAGAACGGGACCGACGGCACGCTGGGCG-TGGCCATCGACGC 59198 Query 165887 CGTGCGCACTGCCGCCCAGCCACACACCTTTCTCTGGGT 165925 | | || | | | || || ||| |||||| | ||| Sbjct 59197 CATCGGCGCCGTCAAGCACCCCCACCACTTTCTGTCGGT 59159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177599391763752