Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1434 134 1e-26 seq2143 123 2e-23 >seq1434 Length=58724 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||| | || | || |||||||| || |||||||| |||| | Sbjct 22714 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 22773 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| | |||| || |||||||| || ||||| ||||| ||||||||||||| || Sbjct 22774 AGGGTCCTGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 22833 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | | || |||||||| |||||| Sbjct 22834 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCGCTCGACTCCACC 22893 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||||| | || || || || |||||||| Sbjct 22894 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 22940 >seq2143 Length=14442 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||| || | |||| |||||||||||||||||| |||| ||| || ||| | || ||| Sbjct 10128 ACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCC 10069 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | |||||| || || || ||||| ||||| ||||| | || | | ||||||| | || Sbjct 10068 AACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGGATTCCTTCCTTGT-CTTG 10010 Query 35648 ATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | || | || | |||| | | ||||| ||| || ||||||| |||||| || || Sbjct 10009 AATCTTGGATTTAACGTTGTCGATTGTGTCTGACGACTCTACCTCCAACGTGATGGTCTT 9950 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||||||| || || || |||||||| Sbjct 9949 GCCCGTCAAAGTCTTGACGAAGATCTGCAT 9920 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | || || ||||| ||||||||||| |||| | || || |||| || Sbjct 9900 ACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCGTCCTCA 9841 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || || || || | || || ||||||| |||| | ||||||||| | Sbjct 9840 AGCTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGG 9781 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| | | | | ||||| || || ||||||| || ||||| ||| Sbjct 9780 ATCTTCGACTTCACATTGTCGATGGTGTCCGAGGACTCGACCTCCAGAGTAATCGTCTTA 9721 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||||| || || |||||||| Sbjct 9720 CCCGTGAGGGTTTTGACGAAAATCTGCAT 9692 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| || | ||| || || | || ||||||||||||||||| || Sbjct 10339 CTCCTTCTGGATATTGTAGTCAGACAAAGTCCGGCCATCCTCCAGCTGCTTACCCGCGAA 10280 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||| ||||| | |||| | |||||||| | ||| || | || || Sbjct 10279 GATCAAGCGCTGTTGGTCAGGCGGAATACCCTCCTTGT-CTTGAATCTTGGATTTGACGT 10221 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||||| |||||| ||||| | || || ||||| || || | ||| || | Sbjct 10220 TGTCGATCGTGTCGGACGATTCAACCTCGAGTGTAATTGTTTTGCCGGTAAGAGTCTTGA 10161 Query 35724 CAAATATCTGCAT 35736 | || || ||||| Sbjct 10160 CGAAGATTTGCAT 10148 Score = 95.1 bits (104), Expect = 1e-14 Identities = 127/174 (73%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 ||||||||||| ||||||||||| |||| | || || | || || || ||||| || Sbjct 9660 GTACTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCATCCTCAAGTTGCTTGCCG 9601 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| || | ||||| ||||| | ||||| || |||||||||| ||||| ||| Sbjct 9600 GCAAAGATGAGACGCTGTTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTG 9541 Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | |||| | | || ||||| || |||||||| | ||||| || || || || Sbjct 9540 A-CGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT 9488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450781225715680