Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2102 100 9e-16 seq1560 100 9e-16 >seq2102 Length=47513 Score = 100 bits (110), Expect = 9e-16 Identities = 119/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 443708 GCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCA 443767 ||| || |||||||| ||||| ||||| || | || || ||||| ||||| ||||||| Sbjct 28576 GCGCCTTGTCGCTTTCGCTGTCGTCGAGGGCATCTTCTTCAGCGGT-GCTTTCGCCTCCA 28634 Query 443768 TCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCA 443827 |||||||| | || |||||||| | |||| ||| ||||| || ||||| || ||| Sbjct 28635 TCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGCCTGACTTTCTCAAACGAGCTCATCT 28694 Query 443828 GTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 || ||||| || | || |||||| |||||||| || Sbjct 28695 CCCGTGACGAAGGCCTCCACACCGACTTTGCCTGTCTCCT 28734 >seq1560 Length=61984 Score = 100 bits (110), Expect = 9e-16 Identities = 354/543 (65%), Gaps = 20/543 (4%) Strand=Plus/Minus Query 254972 GGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGC 255031 |||||| | || ||| | ||||| ||||||||| |||||| |||||||| || || ||| Sbjct 8131 GGCATTGTTCCTATGCTGCGTGTCTTCAACAACACGGCTCGTTACGTCGACCAGGGTGGC 8072 Query 255032 GGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA---CATTGAA 255088 ||| || || || || || |||||||||| |||||||||||||| || | | || Sbjct 8071 AACAAGCGTCCCGGTGCCTTTGCCATCTACCTTGAGCCGTGGCACGCAGATGTCTTCGA- 8013 Query 255089 CGGTTTTTACTGCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTAC 255148 ||| | ||| | || ||| | |||||| | |||||||| | | | Sbjct 8012 --GTTCCTCGACCTGAGGAAGAACCACGGAAAGGAGGAGATTCGTGCCCGCGATCTGTTC 7955 Query 255149 ACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAG 255207 |||| | ||| | |||||||| ||| || || || | || ||| ||||| Sbjct 7954 CTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGTGTTGAGAAGA-ACGGCGACTGGAC 7896 Query 255208 CCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAA 255267 || ||||| || ||| | || || || | |||| | ||||| ||||| || Sbjct 7895 TCTGATGTGCCCTAACGAGTGCCCTGGCCTCGCGGACTGCTACGGTGATGAGTTCGAGGC 7836 Query 255268 ACTGTATCTGGAGTACGAGCGTGCCGGC-CGGTTCGTACG----CCAAGTGCCCGCGAAG 255322 ||||| | ||||||||| |||||| || ||| | | |||| |||| || Sbjct 7835 TCTGTACGAGAAGTACGAGCAGGCCGGCAAGGGTCGCAAGACTATCAAG-GCCC----AG 7781 Query 255323 AAGATCTGGAACACGATGGTGCGCATGCAGCTGGAAACCGGAATGCCGTTCCTATTGCAC 255382 ||| ||||| | | || || ||| || || || | |||||| | ||| || Sbjct 7780 AAGCTCTGGTATTCCATTCTGGAGGCTCAGACCGAGACTGGCAACCCGTTCATGTTGTAC 7721 Query 255383 AAAGACCAC-ATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTCGAA 255441 || |||||| || |||| | | ||||| ||| ||||| || ||| |||| || Sbjct 7720 AAGGACCACTGCAACCGCAAGAGC-AACCAGAAGAACCTGGGTACTATCCGCAGCTCCAA 7662 Query 255442 CCTGTGCACCGAGATTACGTTGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGC 255501 ||| ||||| ||||| | | | || | | | | ||||| ||||| |||||| | || Sbjct 7661 CCTTTGCACAGAGATCATGGAGTACTCTGCCCCTGACGAGGTTGCCGTATGCAACCTTGC 7602 Query 255502 GTC 255504 || Sbjct 7601 TTC 7599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588291310181220