Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1560 289 3e-73 seq215 118 1e-21 seq2102 82.4 8e-11 >seq1560 Length=61984 Score = 289 bits (320), Expect = 3e-73 Identities = 532/777 (68%), Gaps = 16/777 (2%) Strand=Plus/Minus Query 53170 TGGTGAGACGCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTA 53229 || ||||| ||| ||| | | ||||||| || || | |||||| |||||| || Sbjct 8453 TGTTGAGAGGCCACAGCACATGATCATGCGTGTTGCTGTAGGTATCTGGGGTGACAACAT 8394 Query 53230 CACGCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCC 53289 ||||||| ||||| ||| || | ||| | || | ||| || ||||| | || Sbjct 8393 TGAGCGTGTCATCGAGACCTACAACCTTATGTCCAGCAAATTCTTCACACACGCGTCCCC 8334 Query 53290 AACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGAT 53349 || || |||||||| || || || |||| |||| ||||||||||| | || Sbjct 8333 GACGCTCTTCAACGCCGGCACACCGCAGGCTCAATTGTCATCATGCTTCCTGGTTGACAT 8274 Query 53350 GAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAA 53409 |||||||||| ||||| |||||||| || || |||||| |||||| |||||||| Sbjct 8273 GAAGGATGACAGTATCGAGGGCATCTATGATACCCTCAAGACCTGTGCCATGATCTCCAA 8214 Query 53410 GTGGTCGGGTGGTATCGGTATCCACTGC--TCGAACGTCCGTGCGAACGGCACACCAATC 53467 | | | || ||||||||| || || | ||| | ||||||| | || | ||| Sbjct 8213 GATGGCTGGCGGTATCGGTCTCAACGTCCATCGTA--TCCGTGCCACTGGTTCCTATATC 8156 Query 53468 AAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACG 53527 || || |||||| | | |||| || || |||||||| || ||||||||||||||| Sbjct 8155 GCCGGTACCAACGGCACCTCGAATGGCATTGTTCCTATGCTGCGTGTCTTCAACAACACG 8096 Query 53528 GCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAG 53587 || || |||||| |||||||||| ||||| || | || ||||||||||| ||| Sbjct 8095 GCTCGTTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATCTACCTTGAG 8036 Query 53588 CCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAG 53647 ||||||||||| || | | ||||| ||||| ||| | ||| || || | || ||| Sbjct 8035 CCGTGGCACGCAGATGTCTTCGAGTTCCTCGACCTGAGGAAGAACCACGGAAAGGAGGAG 7976 Query 53648 ATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTG 53707 || || ||| || ||||| ||||| ||||| || || || |||||| | || Sbjct 7975 ATTCGTGCCCGCGATCTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGTGTT 7916 Query 53708 GAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTC 53767 |||||| ||| || ||| ||||||||||| ||||||||||| |||||| || | Sbjct 7915 GAGAAGAACGGCGACTGGACTCTGATGTGCCCTAACGAGTGCCCTGGCCTCGCGGACTGC 7856 Query 53768 TACGGTGAGGAGTTTAACGAGATGTATCGGACGTAC--GCAGTTC----AGGGCCGCTAC 53821 |||||||| ||||| | | |||| || |||| |||| | |||| ||| Sbjct 7855 TACGGTGATGAGTTCGAGGCTCTGTACGAGAAGTACGAGCAGGCCGGCAAGGGTCGC--- 7799 Query 53822 AAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACG 53881 |||| ||||||| | || | ||| || | || || || ||| ||||| Sbjct 7798 ---AAGACTATCAAGGCCCAGAAGCTCTGGTATTCCATTCTGGAGGCTCAGACCGAGACT 7742 Query 53882 GGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 || | |||| ||||| |||||||| |||| |||||||||||||||||| Sbjct 7741 GGCAACCCGTTCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAAC 7685 Score = 104 bits (114), Expect = 3e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 55729 CAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGC 55788 |||| || | ||| ||| ||||||||||| | ||| | | || | ||| ||| Sbjct 6911 CAAGAAGCTCTACAAGACTGTGTGGGAGATATCGCAGCGTACCGTCGTTCAGATGGCTGC 6852 Query 55789 TGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTC 55848 ||| |||||||| | ||| || ||||||||||| || |||||| |||| | || | Sbjct 6851 TGACCGTGGTGCCTTCATTGATCAGTCCCAGTCGCTCAACATCCACATGCGCGACCCAAC 6792 Query 55849 ACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTAT 55908 ||| |||| | | |||||||||||| || |||||| || |||||||| ||||| Sbjct 6791 CATGGGCAAGATCACCTCGATGCACTTCACAGGCTGGAAGCTTGGTCTCAAGACCGGTAT 6732 Query 55909 GTACTATCTGCGGAC 55923 |||||| ||||| || Sbjct 6731 GTACTACCTGCGAAC 6717 >seq215 Length=68854 Score = 118 bits (130), Expect = 1e-21 Identities = 295/447 (66%), Gaps = 6/447 (1%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || |||||||| || || |||||||||||||||| ||| || | || ||| ||||| | | Sbjct 11754 CCAGTACCGATACCATCGGCACCGTTGACCAGAACCATTGGAATAACAGGAGCGTAGACC 11813 Query 151936 TCCGGCTCCA---CCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCC 151992 | ||||| | ||| | |||||||| | | || | || ||||| | ||| Sbjct 11814 TTGGGCTCAATGGCCTTT---CCGTCATCGACCTGGTGCTGCAGAACGGGCTCATCAAGG 11870 Query 151993 GGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCC 152052 || | || | || || | | ||| | || ||| ||||| || | ||||||| Sbjct 11871 GGGTTAAACACACGACGCGCGAAAGGTGAGAGGCGAGTGTGAATGTAACGAGCGCTGGCC 11930 Query 152053 GCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGG 152112 ||||| | || || || || | ||||| | ||||| || || || ||||| | Sbjct 11931 GCATCGCTACCGCCCTGAAGTCGAGAACCAAAATTGCCAGAAGGTTCCAGACAGTTGACG 11990 Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCA 152172 ||||||| ||| || | || || |||| | | || || ||| || || || Sbjct 11991 TTGTTGGAGCCTACATAGTTTTGCGCCAGACCTATGATTGTCTGCTGAAGTGAGGCCTCG 12050 Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232 |||||||| || || | || ||||| || |||||| |||| || | |||||| ||||| Sbjct 12051 CCGTGGTGGTAAGCAGCCTTCTCCGAGACGTATCCAGCCAGCTCGACAACCTTCTTGTCC 12110 Query 152233 GTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCG 152292 | |||||||| || | || ||| | || ||||| ||||| || |||| || Sbjct 12111 TTGACCAGGTTCTGTTTAAAGCACGCGAATATGACCTTCCGCTGTCCAGGCTTCAGTCCA 12170 Query 152293 TCCACCACGTGAGGAATCGAACGCTTG 152319 || | || || ||||||||| || Sbjct 12171 TCAATCATAGACGGTATCGAACGCATG 12197 Score = 113 bits (124), Expect = 5e-20 Identities = 194/280 (69%), Gaps = 4/280 (1%) Strand=Plus/Plus Query 117293 GGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGC 117352 |||| ||||||||| ||||||||||| ||| || ||||| | || || ||| || Sbjct 11895 GGTGAGAGGCGAGTGTGAATGTAACGAGCGCTGGCCGCATCGCTACCGCCCTGAAGTCGA 11954 Query 117353 GTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGA 117412 | ||| || | ||| || |||| ||| | |||||||| ||| ||| ||||||| Sbjct 11955 GAACCAAAATTGCCAGAAGGTTCCAGACAGTTGACGTTGTTGGAGCCTACATAGTTTTGC 12014 Query 117413 GCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCC 117472 |||| | || || || || ||||| || ||||| || || | || |||| Sbjct 12015 GCCAGACCTATGATTGTCTGCTGAAGTGAGGCCTCGCCGTGGTGGTAAGCAGCCTTCTCC 12074 Query 117473 GCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGC 117530 | ||||| || ||||||| | |||||| |||| |||| |||||||| || | || Sbjct 12075 GAGACGTATCCAGCCAGCTCGACAACCTTCTTGTCCTTGAC--CAGGTTCTGTTTAAAGC 12132 Query 117531 AGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATC 117570 | || | || ||||| ||||| | |||||||| ||||| Sbjct 12133 ACGCGAATATGACCTTCCGCTGTCCAGGCTTCAGTCCATC 12172 Score = 91.5 bits (100), Expect = 2e-13 Identities = 91/117 (78%), Gaps = 6/117 (5%) Strand=Plus/Plus Query 119074 ACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCT---G 119130 |||||| | ||||| ||||| || || |||||||| ||||| || |||| || | Sbjct 13811 ACTGAAGATGTTGGTGAGCTTTGCGCCATATCCGTTGCGACCTCC---CACGGTCTTGAG 13867 Query 119131 CTCCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187 ||||| ||||| ||||||||| | ||||| ||||| ||||||||||| || ||||| Sbjct 13868 CTCCTTGTCGTCGTAGTTGGAACCCGTCAAGAGGTGACCAAAGATGAGTTCCGGGAT 13924 >seq2102 Length=47513 Score = 82.4 bits (90), Expect = 8e-11 Identities = 177/262 (68%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 75009 TCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAAC 75068 ||||||| | |||| |||| || ||||| ||||| || || || ||| | | Sbjct 28403 TCCTTGATGTATGTGTCGATCAGGAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATG 28344 Query 75069 GACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAAATTCA 75126 |||| | ||||||| | |||||||| | |||||| || || | |||| ||| Sbjct 28343 ATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGGAATCTGGACTTCGGCGCTGAAGCGCTCA 28284 Query 75127 TGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGA 75186 | | |||||| |||||||||| ||||| |||||||| || || || | || Sbjct 28283 A--CCAGATTCTCGTTGACGATGCCATCCGAAGCGGCGAAGAAGGCGAGAATGTGCGAGA 28226 Query 75187 TAAAGTGGCGCTCATCGTCAGTGAGTTTGTC---CCAATCCTTCAGGTCCCCCGCCAAAT 75243 | |||| | ||||| |||||||| |||| ||| || | || ||| | ||||| Sbjct 28225 TGAAGTACTGTTCATCTTCAGTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTAGACAAAT 28166 Query 75244 CAATCTCCTCGACCGTCCAGAA 75265 ||||||| || | |||||||| Sbjct 28165 CAATCTCTTCCGCGGTCCAGAA 28144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547200978920800