Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2143 163 7e-35 seq1434 141 2e-28 seq577 127 5e-24 >seq2143 Length=14442 Score = 163 bits (180), Expect = 7e-35 Identities = 171/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | ||||| | |||||| ||| || || || ||||| || || | ||| Sbjct 9916 TCCACGGAGACGAAGGACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAGTCGGAAAG 9857 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 |||| || || || ||||||||||| ||||| || || ||||||||||| || |||| Sbjct 9856 AGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCCGGGGGAAT 9797 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || |||||||| |||||||| ||||| || ||||||||||| ||| || ||||| Sbjct 9796 ACCCTCCTTGTCTTGGATCTTCGACTTCACATTGTCGATGGTGTCCGAGGACTCGACCTC 9737 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| |||||||| || || || || | |||||| Sbjct 9736 CAGAGTAATCGTCTTACCCGTGAGGGTTTTGACGAAAATCTGCAT 9692 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||| || ||||| ||||| || ||||| || || || | | || Sbjct 10369 ACGAAGACGAAGCACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAAAGT 10310 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || ||||| ||||||||||| || |||||||| | ||| ||||||||||| |||| || Sbjct 10309 CCGGCCATCCTCCAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGGAATACC 10250 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| || ||||| ||| ||||| ||||| ||||| || |||||||||||| Sbjct 10249 CTCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATCGTGTCGGACGATTCAACCTCGAG 10190 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || || |||||||| || || | ||||| Sbjct 10189 TGTAATTGTTTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 10148 Score = 140 bits (154), Expect = 8e-28 Identities = 166/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | ||||| ||||| || || ||||| ||||| ||||| || || | | Sbjct 10144 TCCACGCAGACGGAGGACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGACAA 10085 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||||| |||| |||||| || ||||| || | || |||||||| || || | Sbjct 10084 CGTGCGCCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGGAT 10025 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||||||||| || ||||| ||| ||||| ||||| ||||| || || ||||| Sbjct 10024 TCCTTCCTTGTCTTGAATCTTGGATTTAACGTTGTCGATTGTGTCTGACGACTCTACCTC 9965 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| ||||| | |||||| || || | |||||| Sbjct 9964 CAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 9920 Score = 129 bits (142), Expect = 1e-24 Identities = 145/193 (75%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| ||||| ||| || || ||||| || || | ||| |||| ||||| Sbjct 9675 AGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCATCC 9616 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| || ||||| || || |||||||| ||||||| || ||||||||| Sbjct 9615 TCAAGTTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCGGGAGGAATGCCCTCCTTGTCC 9556 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079 || ||||| || ||||| |||||||| || ||| || |||||||| ||||| Sbjct 9555 TGAATCTTCGACTTGACGTTGTCGATGGTATCGCTAGA---CTCCACCTCGAGGGTGATG 9499 Query 211080 GTCTTTCCCGTGA 211092 ||||| || |||| Sbjct 9498 GTCTTGCCAGTGA 9486 >seq1434 Length=58724 Score = 141 bits (156), Expect = 2e-28 Identities = 161/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||| ||| || |||||||| || || | |||||||| || || Sbjct 22729 AGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCCGTCC 22788 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| | ||| || ||||| || || | || ||||||||| Sbjct 22789 TCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 22848 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||||||| || || || |||||||| || ||| || ||||| || ||||| Sbjct 22849 TGGATCTTGGACTTGACATTGTCGATGGTATC---GCTCGACTCCACCTCAAGGGTGATA 22905 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| ||||| || || | |||||| Sbjct 22906 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 22940 >seq577 Length=12318 Score = 127 bits (140), Expect = 5e-24 Identities = 135/179 (75%), Gaps = 8/179 (4%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||| || | || || || ||||||||||| ||||||||| Sbjct 6021 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATA 6080 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || ||||||||||| || | ||| ||||||||||||||||| | |||| Sbjct 6081 AGACGCTGTTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTT--------GGACTTCG 6132 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| ||| || ||||| || ||||| ||||| || || |||||||| || || Sbjct 6133 ATCGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 6191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159119385809540