Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2143 185 2e-41 seq1434 154 3e-32 seq577 132 1e-25 seq2102 100 6e-16 seq1400 89.7 1e-12 >seq2143 Length=14442 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| |||| || | |||||||| || || ||||||||||| | | Sbjct 9918 CCTCCACGGAGACGAAGGACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAGTCGGAA 9859 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| ||||| || || || || || || || | |||||||||||| ||| Sbjct 9858 AGAGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCCGGGGGA 9799 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||||||||||||||| | || || | ||||| |||||||| | ||||| Sbjct 9798 ATACCCTCCTTGTCTTGGATCTTCGACTTCACATTGTCGATGGTGTCCGAGGACTCGACC 9739 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| |||||||||||||| | || || ||||| |||||||| Sbjct 9738 TCCAGAGTAATCGTCTTACCCGTGAGGGTTTTGACGAAAATCTGCAT 9692 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| || ||||| | || || || ||||| |||||||||| Sbjct 10374 CCGCCACGAAGACGAAGCACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGAC 10315 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || ||||||||||| || || || || || |||||||| || ||||||||| |||| Sbjct 10314 AAAGTCCGGCCATCCTCCAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGGA 10255 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||||||||| ||||| | ||| ||| | ||||| ||||| || | ||| || Sbjct 10254 ATACCCTCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATCGTGTCGGACGATTCAACC 10195 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || || || || || | |||||| ||||| || ||||| Sbjct 10194 TCGAGTGTAATTGTTTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 10148 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| |||||||| || || ||||| || | ||| || ||||| ||||||||||| | Sbjct 10147 ACCTCCACGCAGACGGAGGACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGA 10088 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | |||||| |||||||| | || || || || || ||||| || |||||||| || Sbjct 10087 CAACGTGCGCCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGG 10028 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||| ||||| | ||| ||| | ||||| ||||| || | || || Sbjct 10027 GATTCCTTCCTTGTCTTGAATCTTGGATTTAACGTTGTCGATTGTGTCTGACGACTCTAC 9968 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct 9967 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 9920 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || ||||| || || || || | || || || || || ||||||||||| | | Sbjct 9690 CCACCGCGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTGTAGTCGGAA 9631 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||||||||| ||||| || ||||||||||| | ||| |||||||| ||| Sbjct 9630 AGAGTCCGGCCATCCTCAAGTTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCGGGAGGA 9571 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || ||| | ||||| || || || || || Sbjct 9570 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACC 9511 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 9510 TCGAGGGTGATGGTCTTGCCAGT 9488 >seq1434 Length=58724 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | ||||| || || |||||||||||||| | Sbjct 22713 ACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 22772 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||| ||||| || || || |||||||||||||| || || ||||| || Sbjct 22773 CAGGGTCCTGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGG 22832 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || || | ||||| || || | || || Sbjct 22833 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCGCTCGACTCCAC 22892 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 22893 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 22940 >seq577 Length=12318 Score = 132 bits (146), Expect = 1e-25 Identities = 137/179 (77%), Gaps = 8/179 (4%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | ||| |||||||| ||||| || || || || || ||||| Sbjct 6021 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATA 6080 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| ||||||||| || || ||||||||||| |||||||| | || ||| Sbjct 6081 AGACGCTGTTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGG-----AC---TTCG 6132 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||||||| | ||||| || || ||||| ||||| || |||| |||||| ||||| Sbjct 6133 ATCGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 6191 >seq2102 Length=47513 Score = 100 bits (110), Expect = 6e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 230193 GAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGG 230252 |||||| || || ||| | || ||| || | |||||||| || | || ||| | Sbjct 28811 GAGTTCCTTACAGAGGCTTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACCTTATGAAG 28870 Query 230253 CAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTAT 230312 || || || || || || ||||| | || | || || || || ||||||| || || Sbjct 28871 CAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTCGGAAACGAGAAGGTCTAC 28930 Query 230313 AACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTC 230372 ||||| ||||| |||| || |||||| ||||||||| || || || |||||| Sbjct 28931 CGCTCCACCAACCCATTCGACTTCATGGAGAACATTTCACTGGGTGGCAAGACCAACTTC 28990 Query 230373 TTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||| |||||||| |||| || |||| | ||||||| Sbjct 28991 TTCGAGAAGCGTGTAGGCGAGTACCAAAAGGCCGGTGT 29028 >seq1400 Length=65033 Score = 89.7 bits (98), Expect = 1e-12 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 315667 ACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCCACA 315726 || ||||| |||| ||||| ||||||| | || |||||||||| || ||||||| Sbjct 21466 ACACCACCCTCGAACTTCTTGAGCGCCTTGGACAGGGCACCGAGAGAGTCACGGTCCAAG 21407 Query 315727 AAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGC-GGCGCCGAT 315785 ||||||| ||||| || || ||||| | ||| || | ||||| |||| |||| | | Sbjct 21406 TAGTTGGTAGGCTCGTCCAGGACGATCAAGTGAGGACGCTGCCAC-GAGCAGGCGGCAAG 21348 Query 315786 AACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATG 315833 |||| ||| | || ||||||||||| || || ||||| || || Sbjct 21347 GACGACCTTGACACGCTGACCACCAGACAGACCGCGCATGCGCGAGTG 21300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046709748684184