Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1434 159 2e-34 seq2143 131 1e-25 seq577 87.8 1e-12 >seq1434 Length=58724 Score = 159 bits (176), Expect = 2e-34 Identities = 178/234 (76%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||| ||||| || ||||||||||| ||||||||||| |||| Sbjct 22714 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 22773 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 || || || |||| || |||||||| |||||||||||||| |||||||| || | | Sbjct 22774 AG--GGTCCTGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGG 22831 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||| ||||| ||| ||||| ||| || ||| | ||||| ||| || || Sbjct 22832 GGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT--CGATGGTATCGCTCGACTC 22889 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 |||||| | || || ||||| |||||||||||||| |||||||| |||||||| Sbjct 22890 CACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 22943 >seq2143 Length=14442 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||||| ||||| || |||||||| |||| || || |||| || Sbjct 9900 ACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCGTCCTCA 9841 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || || | ||| || || || | || | ||| ||||| || Sbjct 9840 AGCTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGG 9781 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | |||||||| | ||| || ||||||| ||||||||||| Sbjct 9780 ATCTTCGACTTCACATTGTCGATGGTGTCCGAGGACTCGACCTCCAGAGTAATCGTCTTA 9721 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||||||| || ||||| || |||||| Sbjct 9720 CCCGTGAGGGTTTTGACGAAAATCTGCATG 9691 Score = 95.1 bits (104), Expect = 9e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| || || || || |||||| ||||| ||||| || | | || | || || Sbjct 10357 CACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAAAGTCCGGCCATCCTC 10298 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || || |||||||| ||||| || || | || | ||| ||||| || Sbjct 10297 CAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGGAATACCCTCCTTGTCTTG 10238 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| | || | ||| | || ||||||| ||||| ||||| | ||||| || | Sbjct 10237 AATCTTG-GATTTGACGTTGTCGATCGTGTCGGACGATTCAACCTCGAGTGTAATTGTTT 10179 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || ||||| |||||||||||||| Sbjct 10178 TGCCGGTAAGAGTCTTGACGAAGATTTGCAT 10148 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || |||||||| || |||||||| |||| || || | || || Sbjct 9673 CACGAGGTGGAGAGTACTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCATCCTC 9614 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| ||||||||||| | |||||| || || | ||| | || ||||| ||| Sbjct 9613 AAGTTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCGGGAGGAATGCCCTCCTTGTCCTG 9554 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| | | | ||||| ||| || |||||||| | || || ||||| Sbjct 9553 AATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTT 9494 Query 44308 TCCCGTGA 44315 || |||| Sbjct 9493 GCCAGTGA 9486 >seq577 Length=12318 Score = 87.8 bits (96), Expect = 1e-12 Identities = 128/182 (70%), Gaps = 8/182 (4%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| |||| || ||| |||| || |||||||| || || |||| Sbjct 6019 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGA 6078 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 | | |||||| || || | || | || ||||| ||| ||||| ||| Sbjct 6079 TAAGACGCTGTTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTT-------- 6130 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | || ||||| | ||| || ||||||| || || ||||| || || || |||||||||| Sbjct 6131 CGATCGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGA 6190 Query 44328 AG 44329 || Sbjct 6191 AG 6192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359980765306932