Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548795.1_202016-02-04] 2,196 sequences; 42,458,485 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2143 141 2e-28 seq1434 129 1e-24 seq577 118 3e-21 >seq2143 Length=14442 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || || ||||| || || |||||||| ||| || ||| Sbjct 10151 CAAATCTTCGTCAAGACTCTTACCGGCAAAACAATTACACTCGAGGTTGAATCGTCCGAC 10210 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||||||| |||||||| ||||| || || || || || ||||| || Sbjct 10211 ACGATCGACAACGTCAAATCCAAGATTCAAGACAAGGAGGGTATTCCGCCTGACCAACAG 10270 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || ||||| || ||||| ||||| | | || || || || Sbjct 10271 CGCTTGATCTTCGCGGGTAAGCAGCTGGAGGATGGCCGGACTTTGTCTGACTACAATATC 10330 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||||||||| Sbjct 10331 CAGAAGGAGTCGACTCTGCATCTTGT 10356 Score = 129 bits (142), Expect = 1e-24 Identities = 142/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||| ||||| || || ||||| || || ||||| || ||| ||| Sbjct 9695 CAGATTTTCGTCAAAACCCTCACGGGTAAGACGATTACTCTGGAGGTCGAGTCCTCGGAC 9754 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| || ||||| || || || || |||||||| ||| Sbjct 9755 ACCATCGACAATGTGAAGTCGAAGATCCAAGACAAGGAGGGTATTCCCCCGGACCAACAA 9814 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || ||||| || || || |||||||| |||| || ||| | Sbjct 9815 CGTCTCATTTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACTCTTTCCGACTACAACATT 9874 Query 178104 CAAAAAGAA 178112 || || ||| Sbjct 9875 CAGAAGGAA 9883 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||| | || || || || ||||| | ||||| || |||||| Sbjct 9923 CAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTAGAGTCGTCAGAC 9982 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| ||| |||||||| ||||| ||||||||||| || ||||| || Sbjct 9983 ACAATCGACAACGTTAAATCCAAGATTCAAGACAAGGAAGGAATCCCCCCAGACCAACAG 10042 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || ||||| ||||| ||| | || ||||| | || | |||| || ||| | Sbjct 10043 CGATTGATTTTCGCTGGAAAGCAGTTGGAGGATGGGCGCACGTTGTCCGACTACAACATT 10102 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || ||||| || || Sbjct 10103 CAAAAGGAGTCTACGCTGCACCTGGT 10128 Score = 122 bits (134), Expect = 2e-22 Identities = 131/172 (76%), Gaps = 6/172 (3%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCAGACACCATCGAGAACGTCA 177999 |||| || || || ||||||||||||||||| ||| || |||||||| ||||||| Sbjct 9486 TCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGC---GATACCATCGACAACGTCA 9542 Query 178000 AACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCG 178059 | |||||||||||||| || || || ||||| ||||| || || || ||||| |||| Sbjct 9543 AGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAGCGTCTCATCTTTGCCG 9602 Query 178060 GAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 | || || || || ||||| |||||||| |||| || ||| | || || || Sbjct 9603 GCAAGCAACTTGAGGATGGCCGGACTCTTTCCGACTACAACATTCAGAAGGA 9654 >seq1434 Length=58724 Score = 129 bits (142), Expect = 1e-24 Identities = 144/191 (75%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || ||||| || || ||||| || || || |||||||| |||||||| ||| Sbjct 22937 CAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC--- 22881 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || |||||||| || ||||| ||||| |||||||| || || ||||| ||||||||| Sbjct 22880 GATACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 22821 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || | ||||| ||||| || |||||||| || || ||||| || |||| || ||| Sbjct 22820 CAGCGCTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCAGGACCCTGTCCGACTACAAC 22761 Query 178101 GTCCAAAAAGA 178111 |||| || || Sbjct 22760 ATCCAGAAGGA 22750 >seq577 Length=12318 Score = 118 bits (130), Expect = 3e-21 Identities = 134/179 (75%), Gaps = 8/179 (4%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 |||||||| ||||| || || || || |||||||| ||||| || ||| ||||| ||| Sbjct 6191 TTCGTGAAGACTCTGACTGGCAAGACCATCACCCTGGAGGTCGAGTCCTCGGACACGATC 6132 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || ||| || ||| |||||||| || |||||||| || ||||| || || ||| Sbjct 6131 GAA---GTCCAA-----GATCCAGGACAAGGAGGGAATCCCCCCTGACCAACAGCGTCTT 6080 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||| || || ||||| || || || | |||||| |||| || ||| |||| || Sbjct 6079 ATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGACTACAACATCCAGAA 6021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203697331518024