Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1672 172 6e-38 seq1536 127 2e-24 seq1909 111 2e-19 seq46 105 7e-18 >seq1672 Length=37181 Score = 172 bits (190), Expect = 6e-38 Identities = 274/385 (71%), Gaps = 6/385 (2%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGA-GCGC 117040 |||||||||| ||||| ||| | |||||| | | || ||| | || | | || | |||| Sbjct 8685 AGAAGGCCGACTGGGCTCTGAGGTGGATCACTGACA-AGAAGTCGACATTTGCCACGCGC 8627 Query 117041 CTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTT 117100 || || || ||||| | |||||||||| ||||||| || ||||||| |||| || Sbjct 8626 CTTGTCGCTTTCGCTGTCGTCGAGGGCATCTTCTTCAGCGGTGCTTTCGCCTCCATCTTC 8567 Query 117101 TGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGG 117160 ||||||||||| || ||| | |||||||||||||||||| ||||||||||||||| | Sbjct 8566 TGGCTCAAGAAGCGTGGCTTGATGCCCGGCCTGACTTTCTCAAACGAGCTCATCTCCCGT 8507 Query 117161 GACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG 117220 ||||| || || || ||||||||||||| | |||||| || || | | || Sbjct 8506 GACGAAGGCCTCCACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCC 8447 Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 ||| || ||| |||||| || |||||| ||| || ||||| ||||| Sbjct 8446 AGCAAGGATATTGTCCAGGAGATTGTTGTCGACGCTGTCAAGATTGAGCAAGAGTTCCTT 8387 Query 117281 ACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACA 117338 || || || |||| |||| || ||||| | || || || | ||| ||| |||| Sbjct 8386 ACAGAGGCTTTGCC-CTGCGCCCTCCTGGGCATGAA-CGCCAACCTTATGAAGCAGTACA 8329 Query 117339 TCGAGTTCGTCGCCGACAGGCTGCT 117363 | ||||| ||||| ||||| || || Sbjct 8328 TTGAGTTTGTCGCTGACAGACTTCT 8304 Score = 167 bits (184), Expect = 2e-36 Identities = 212/286 (74%), Gaps = 7/286 (2%) Strand=Plus/Minus Query 116637 TGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGT 116696 |||||| |||||||| ||||||||||| || |||||||||| || ||| | || ||| Sbjct 9094 TGTGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACCGCGGAAGAGATTGATTTGT 9035 Query 116697 CCAAGGA-CACGAGCGACTGGGAGCGCTTGAAC---GACAACGAGCGCCATTTCATCAAG 116752 | ||||| | | | ||||||| | | | | || | || | | |||||| | Sbjct 9034 CTAAGGATCTCCA-CGACTGGAACAACAAGCTCACTGAAGATGAACAGTACTTCATCTCG 8976 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || ||||| |||||||| || ||||||||||||||||||||||| ||||| Sbjct 8975 CACATTCTCGCCTTCTTCGCCGCTTCGGATGGCATCGTCAACGAGAATCTGGTTGAGCGC 8916 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | || | ||| | |||||||||| |||||||||||||| |||||| || Sbjct 8915 TTCAGCGCCGAAG-TCCAGATTCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGAT 8857 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||| | ||||| || | || ||| ||| |||||||| ||| Sbjct 8856 GGAGAACATCCACTCCGAGACCTACTCGCTCCTGATCGACACATAC 8811 >seq1536 Length=70269 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || |||||| | || || || | | | Sbjct 29256 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 29197 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | ||||| || || | ||||| ||||| |||||| |||||||| Sbjct 29196 GATACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 29137 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || ||||| ||||| || |||| | ||||| |||||||||| Sbjct 29136 CAGCGCTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCAGGACCCTGTCCGACTACAAC 29077 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| ||| || || || ||| |||| Sbjct 29076 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCG 29042 >seq1909 Length=49172 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| |||||||| || || || || | || ||||| || | Sbjct 40899 ATGCAGATTTTCGTCAAAACCCTCACGGGTAAGACGATTACTCTGGAGGTCGAGTCCTCG 40840 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | ||| || || | ||||| ||||| || ||| ||||||| Sbjct 40839 GACACCATCGACAATGTGAAGTCGAAGATCCAAGACAAGGAGGGTATTCCCCCGGACCAA 40780 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||| | ||| ||||| ||||| || |||| || || || |||||||||| Sbjct 40779 CAACGTCTCATTTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACTCTTTCCGACTACAAC 40720 Query 40870 ATCCAGAAGGA 40880 || |||||||| Sbjct 40719 ATTCAGAAGGA 40709 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || |||||||| || || |||| || ||| | || Sbjct 40443 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAAACAATTACACTCGAGGTTGAATCGTCC 40384 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||| || |||| ||||| ||||| || || | ||||| Sbjct 40383 GACACGATCGACAACG-TCAAATCCAAGATTCAAGACAAGGAGGGTATTCCGCCTGACCA 40325 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || | |||| |||||| || |||||||| || | || || | |||||||| Sbjct 40324 ACAGCGCTTGATCTTCGCGGGTAAGCAGCTGGAGGATGGCCGGACTTTGTCTGACTACAA 40265 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| | || |||||||| ||| | || | | |||||| Sbjct 40264 TATCCAGAAGGAGTCGACTCTGCATCTTGTGCTTCGTCTTCGTGGCGGC 40216 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| |||| || || | | ||| | | | | |||| ||||| Sbjct 41105 TCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACG-TCAAG 41047 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || |||| ||||| |||||||| || | ||||| || || ||||||| || ||| Sbjct 41046 TCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAGCGTCTCATCTTTGCCGGC 40987 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || || || || || | || || || |||||||||||| ||||||||| || || Sbjct 40986 AAGCAACTTGAGGATGGCCGGACTCTTTCCGACTACAACATTCAGAAGGAGAGTACTCTC 40927 Query 40891 CATCTAGTGTTGCGC 40905 || || ||| | ||| Sbjct 40926 CACCTCGTGCTCCGC 40912 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| |||||||| | || || || | | Sbjct 40671 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTAGAGTCGTCA 40612 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | || || | ||| ||||| || || |||||| | ||||| Sbjct 40611 GACACAATCGACAACGTTAAATCCAAGA-TTCAAGACAAGGAAGGAATCCCCCCAGACCA 40553 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||| | || | ||| || || ||| |||| || | |||||| | ||||||||| Sbjct 40552 ACAGCGATTGATTTTCGCTGGAAAGCAGTTGGAGGATGGGCGCACGTTGTCCGACTACAA 40493 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| || |||||| | |||||||| || || Sbjct 40492 CATTCAAAAGGAGTCTACGCTGCACCTGGT 40463 >seq46 Length=8609 Score = 105 bits (116), Expect = 7e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || || ||||| ||||||||| | || ||||| || | |||| | Sbjct 2960 TTCGTGAAGACTCTGACTGGCAAGACCATCACCCTGGAGGTCGAGTCCTCGGACACGATC 2901 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | | ||| || || | ||||| ||||| |||||| | ||||| || || || Sbjct 2900 GACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAACAGCGTCTT 2841 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || |||| ||||| || ||||||||||||||||||| Sbjct 2840 ATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGACTACAACATCCAGAAG 2781 Query 40879 G 40879 | Sbjct 2780 G 2780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515206448324800