Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1909 123 2e-23 seq46 98.7 9e-16 seq1451 89.7 4e-13 >seq1909 Length=49172 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | |||||||| |||||||||||||| ||| || |||||| |||||| Sbjct 40463 ACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCC 40522 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||| ||||||||| | || | ||||| || || || || || || ||||||||| | Sbjct 40523 AACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGGATTCCTTCCTTGTCTTGA 40582 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || |||||| | |||| ||||| | ||| ||||| | || | || ||| Sbjct 40583 ATCTTGGATTTAACGTTGTCGATTGTGTCTGACGACTCTACCTCCAACGTGATGGTCTTG 40642 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || |||| ||| || || || ||||||||| || Sbjct 40643 CCCGTCAAAGTCTTGACGAAGATCTGCATGCCT 40675 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || || ||||||||||| ||| | ||| || ||||| Sbjct 40691 ACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCGTCCTCA 40750 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| | |||||||| || || || || || || |||||||||||| Sbjct 40751 AGCTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGG 40810 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||||| | ||||||||| | || | ||| || Sbjct 40811 ATCTTCGACTTCACATTGTCGATGGTGTCCGAGGACTCGACCTCCAGAGTAATCGTCTTA 40870 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || ||||| || |||||||||||| Sbjct 40871 CCCGTGAGGGTTTTGACGAAAATCTGCATG 40900 Score = 96.9 bits (106), Expect = 3e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||||| ||| ||| || ||||||||||| ||| | ||| || |||||| Sbjct 40918 CACGAGGTGGAGAGTACTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCATCCTC 40977 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 || || || || || ||||||||||||| || |||||||| |||||||||||||| Sbjct 40978 AAGTTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCGGGAGGAATGCCCTCCTTGTCCTG 41037 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| ||| || | ||| ||||||| ||| | || || Sbjct 41038 AATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTT 41097 Query 118709 GCCGGT 118714 ||| || Sbjct 41098 GCCAGT 41103 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || || ||||| || || ||| || |||||| ||||| || || Sbjct 40247 GTCGACTCCTTCTGGATATTGTAGTCAGACAAAGTCCGGCCATCCTCCAGCTGCTTACCC 40306 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | ||||| || || || || || |||||||||||| ||| || ||| Sbjct 40307 GCGAAGATCAAGCGCTGTTGGTCAGGCGGAATACCCTCCTTGTCTTGAATCTTGGATTTG 40366 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| | || ||||||| || | ||||||||||| ||||| Sbjct 40367 ACGTTGTCGATCGTGTCGGACGATTCAACCTCGAGTGTAATTGTTTTGCCGGTAAGAGTC 40426 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 40427 TTGACGAAGATTTGCAT 40443 >seq46 Length=8609 Score = 98.7 bits (108), Expect = 9e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||| | |||||| ||||| ||||| || |||||| |||| Sbjct 2782 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATA 2841 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 |||||||| || || || || || ||||||||||| || || || || | ||| Sbjct 2842 AGACGCTGTTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 2901 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 | ||||||| | ||||||||| | ||| | || ||||| |||||||| || || || Sbjct 2902 ATCGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 2960 >seq1451 Length=73604 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/213 (69%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 134121 TTGTTCTTTACGCGTTTCATGAATAGATCGGGAATCCACAGGCCGAGCATTAAATCGCGA 134180 || |||| || || |||||||| ||||| || ||||| || |||| | | |||||| Sbjct 65660 TTCTTCTCAACACGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGATCGCGG 65601 Query 134181 GCTTTAGTGTCTTCGGAGCCCATGTTGCGTCTCAAGTTGAGAAACTCATAAATTTCCGGA 134240 || | | || || || ||| |||| || ||| ||||| | | || | Sbjct 65600 GCACGAATCTCCTCCTTTCCGTGGTTCTTCCTCAGGTCGAGGAACTCGAAGACATCTGCG 65541 Query 134241 TGCCACGGCTCGATGTAGGCGGCGAGGGCACCTTTTCGCTTA---CCACCCTGGTCGACG 134297 ||||||||||| | |||| ||| | |||||| ||||| ||||||||||||||| Sbjct 65540 TGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACG 65481 Query 134298 TGACGCACCATGTTGTTGAAGACTCTCAACATA 134330 | ||| || ||||||||||||| | || |||| Sbjct 65480 TAACGAGCCGTGTTGTTGAAGACACGCAGCATA 65448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433819931130160