Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1672 82.4 8e-11 >seq1672 Length=37181 Score = 82.4 bits (90), Expect = 8e-11 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50691 || || ||| | || || ||||||| | || || ||||| ||| || | ||||| Sbjct 8416 GACGCTGTCAAGATTGAGCAAGAGTTCCTTACAGAGGCTTTGCCCTGCGCCCTCCTGGGC 8357 Query 50692 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGA-TTGTTGTTGCA 50750 |||||||| || | ||| |||||||||||||||| || |||||| || |||| || Sbjct 8356 ATGAACGCCAACCTTATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGC- 8298 Query 50751 GCTGGGACAACCGAAATACTA-TAATGCACGTAACCCCTTTCCGTTTATGAATAACATAT 50809 || ||| | ||| ||| | ||| ||||| || || ||| | ||||| | Sbjct 8297 CCTCGGAAACGAGAAGGTCTACCGCTCCAC-CAACCCATTCGACTTCATGGAGAACATTT 8239 Query 50810 CGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATACAAAA 50860 | ||| ||||| || ||||| ||||| | ||||||||||| ||| ||| Sbjct 8238 CACTGGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTAGGCGAGTACCAAA 8188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507001851393600