Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1909 118 9e-22 seq46 84.2 2e-11 >seq1909 Length=49172 Score = 118 bits (130), Expect = 9e-22 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| || || ||||||| | || || |||||||| Sbjct 40671 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTAGAGTCGTCA 40612 Query 25059 GACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | | || | || | ||| ||||| ||||| || || || ||||| Sbjct 40611 GACACAATCGACAACGTTAAATCCAAGATTCAA-GACAAGGAAGGAATCCCCCCAGACCA 40553 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | ||||| || || || || || || |||| ||||| || ||| ||||| Sbjct 40552 ACAGCGATTGATTTTCGCTGGAAAGCAGTTGGAGGATGGGCGCACGTTGTCCGACTACAA 40493 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 |||||||| || || ||||| || Sbjct 40492 CATTCAAAAGGAGTCTACGCTGCA 40469 Score = 109 bits (120), Expect = 5e-19 Identities = 155/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | ||||| ||| | || ||| |||| || || ||||| Sbjct 40443 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAAACAATTACACTCGAGGTTGAATCGTCC 40384 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| || | || | ||| ||||| || || ||||| ||||| Sbjct 40383 GACACGATCGACAACGTCA---AATCCAAGATTCAA-GACAAGGAGGGTATTCCGCCTGA 40328 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||||| | || || || || || || | || |||| || ||| || || || Sbjct 40327 CCAACAGCGCTTGATCTTCGCGGGTAAGCAGCTGGAGGATGGCCGGACTTTGTCTGACTA 40268 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||| || || || || || || ||| | ||||| Sbjct 40267 CAATATCCAGAAGGAGTCGACTCTGCATCTTGTGCT 40232 >seq46 Length=8609 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || |||||| |||| || || ||||||| | || || ||||| || ||||| ||| Sbjct 2960 TTCGTGAAGACTCTGACTGGCAAGACCATCACCCTGGAGGTCGAGTCCTCGGACACGATC 2901 Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127 || ||||| || ||| ||||| || || || || |||||||||||||| || Sbjct 2900 GACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAACAGCGTCTT 2841 Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || || || ||||| || | || || | |||||| | ||| ||||| || || || Sbjct 2840 ATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGACTACAACATCCAGAA 2782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433317543253700