Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1909 125 2e-23 seq1536 122 2e-22 seq46 111 4e-19 seq125 89.7 1e-12 >seq1909 Length=49172 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||||| | |||||| || || || || || ||||| ||||| Sbjct 40481 TCCTTTTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCCAACTGCTTTCCAGCGAAA 40540 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||||| |||||| |||||||| || || || || || | ||| ||| Sbjct 40541 ATCAATCGCTGTTGG---TCTGGGGGGATTCCTTCCTTGTCTTGAATCTTGGATTTAACG 40597 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || ||| ||||| || | |||||| ||||| || |||| ||||||| Sbjct 40598 TTGTCGATTGTGTCTGACGACTCTACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTG 40657 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 40658 ACGAAGATCTGCAT 40671 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||||||||| | || ||||| || | || || || || || || || |||| Sbjct 40897 CATG-CCACCGCGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTGTAGT 40955 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || || || || || || | ||| || || || ||||| ||||||||||| Sbjct 40956 CGGAAAGAGTCCGGCCATCCTCAAGTTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCGG 41015 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 || || || || || ||||| || |||| || ||||| || || | |||||| || | Sbjct 41016 GAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACT 41075 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGT 288449 | || ||||| ||||| ||||| || || Sbjct 41076 CCACCTCGAGGGTGATGGTCTTGCCAGT 41103 Score = 104 bits (114), Expect = 6e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || || || || | ||| || ||||| | || || || |||||||| ||||| Sbjct 40214 TGGCCGCCACGAAGACGAAGCACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCA 40273 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | | || || || || || | || || || |||||||||| |||||||| | Sbjct 40274 GACAAAGTCCGGCCATCCTCCAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGC 40333 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || || || || || | ||| ||||| || || | ||| |||||| Sbjct 40334 GGAATACCCTCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATCGTGTCGGACGATTCA 40393 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || || || ||||| |||||||||||||| || ||||| Sbjct 40394 ACCTCGAGTGTAATTGTTTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 40443 >seq1536 Length=70269 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | ||||| || || ||||| || ||||||| Sbjct 29030 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 29089 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||| || | || || || || ||||||| ||||| || ||| Sbjct 29090 AGGGTCCTGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 29149 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || || || || || | ||||||||| || || Sbjct 29150 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCGCTCGACTCCACC 29209 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 || || ||||| ||||| || || || ||||||||||| |||||||| || Sbjct 29210 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 29259 >seq46 Length=8609 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| || ||||| ||||| || | || || || |||||||| Sbjct 2782 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATA 2841 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 ||||||||||| | |||||||| || || |||||||| || | ||||| || || Sbjct 2842 AGACGCTGTTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 2901 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | || || || || || || ||||| ||||| || ||||||||||| ||||| Sbjct 2902 ATCGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 2960 >seq125 Length=68985 Score = 89.7 bits (98), Expect = 1e-12 Identities = 191/280 (68%), Gaps = 4/280 (1%) Strand=Plus/Minus Query 325970 GGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAGCTAT-G 326028 || |||||||||| || ||||| | || || | || ||| ||| |||| || | | Sbjct 56397 GGAGTGATGAACTCCTGGAAGAAGTCGGGGATCTGCAGCAGAGAAGG-AAACTGCACTTG 56339 Query 326029 GAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGAT 326088 || ||||| |||| |||||| || ||| ||||||| |||| || | |||||| Sbjct 56338 GAGGAAGTTGATGAGGAGACCCTTGATATGACTTCCGTCGTGATCCTGATCAGCCATGAT 56279 Query 326089 CATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCG-GTTTGAAGGC 326147 ||||| |||||| || ||||| |||||| | ||||| | | | ||| |||| Sbjct 56278 CATCAAATGACCATATCGAAGTCCCTTGGTGTCTGTATACACCTGCTTGTGCTTG-AGGC 56220 Query 326148 CGAGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACGGATGCAT 326207 | || | || |||| | |||||| | ||||||| ||| | | |||||||| Sbjct 56219 CCAGGAACTGCTTGATATTTTGGATTTCCTTGTTCTTCAGGATCTGATCTATGGATGCAT 56160 Query 326208 CGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCC 326247 | || || |||| | ||| |||||||| || ||||| || Sbjct 56159 CTCGCACATTCAGCATTTTACCACGAAGGGGAAACACGCC 56120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179624473642440