Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq125 95.1 3e-14 seq1672 84.2 5e-11 >seq125 Length=68985 Score = 95.1 bits (104), Expect = 3e-14 Identities = 192/280 (69%), Gaps = 4/280 (1%) Strand=Plus/Minus Query 298091 GGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAGCTAT-G 298149 || |||||||||| || ||||| | || || | || ||| ||| |||| || | | Sbjct 56397 GGAGTGATGAACTCCTGGAAGAAGTCGGGGATCTGCAGCAGAGAAGG-AAACTGCACTTG 56339 Query 298150 GAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGAT 298209 || ||||| |||| |||||| || ||| ||||||| |||| || | |||||| Sbjct 56338 GAGGAAGTTGATGAGGAGACCCTTGATATGACTTCCGTCGTGATCCTGATCAGCCATGAT 56279 Query 298210 CATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCG-GTTTGAAGGC 298268 ||||| |||||| || ||||| |||||| | ||||| | | | ||| |||| Sbjct 56278 CATCAAATGACCATATCGAAGTCCCTTGGTGTCTGTATACACCTGCTTGTGCTTG-AGGC 56220 Query 298269 CGAGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACGGATGCAT 298328 | || | || |||| | |||||| | ||||||| ||| | | |||||||| Sbjct 56219 CCAGGAACTGCTTGATATTTTGGATTTCCTTGTTCTTCAGGATCTGATCTATGGATGCAT 56160 Query 298329 CGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCC 298368 | || ||||||| | ||| |||||||| || ||||| || Sbjct 56159 CTCGCACATTCAGCATTTTACCACGAAGGGGAAACACGCC 56120 >seq1672 Length=37181 Score = 84.2 bits (92), Expect = 5e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 ||||||||| | | || ||| |||||||| || || || || ||| | || | || Sbjct 8359 GGCATGAACGCCAACCTTATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTC 8300 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 || || || | ||||| || ||| ||||| ||||| || | ||| |||||| |||| Sbjct 8299 GCCCTCGGAAACGAGAAGGTCTACCGCTCCACCAACCCATTCGACTTCATGGAGAACATT 8240 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738 || || || || || ||||||||||| |||||||| | || || ||| Sbjct 8239 TCACTGGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTAGGCGAGTACCAA 8189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102852021313000