Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1909 96.9 3e-15 >seq1909 Length=49172 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || || | ||| || || |||||||||||||| || | Sbjct 40444 ACCTCCACGCAGACGGAGGACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGA 40503 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || || | |||||| || || |||| | ||||| ||||| || || Sbjct 40504 CAACGTGCGCCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGG 40563 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||||| || ||||| || || || || || | ||| || | || || Sbjct 40564 GATTCCTTCCTTGTCTTGAATCTTGGATTTAACGTTGTCGATTGTGTCTGACGACTCTAC 40623 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| |||||||| || ||||| || ||||| Sbjct 40624 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 40671 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 ||| || ||||||||||| || | | || || |||| |||||||||||||| || | Sbjct 40708 TTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 40767 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAAC 64371 |||||| || || ||||| || ||||| || || || ||||| || || ||| ||| Sbjct 40768 AATGAGACGTTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGGATCTTCGACTTCACATT 40827 Query 64372 CTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTAC 64431 || | || || || || || || | ||| | ||||| || || | ||||| || Sbjct 40828 GTCGATGGTGTCCGAGGACTCGACCTCCAGAGTAATCGTCTTACCCGTGAGGGTTTTGAC 40887 Query 64432 GAAAATTTGCAT 64443 |||||| ||||| Sbjct 40888 GAAAATCTGCAT 40899 Score = 86.0 bits (94), Expect = 6e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || ||||||||||| || | | || || | || ||||| |||||||||||| | Sbjct 40937 TCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCATCCTCAAGTTGCTTGCCGGCAAAG 40996 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| ||||| |||||||||||||| || || || || || || || ||| || Sbjct 40997 ATGAGACGCTGTTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTG 41056 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 || | ||||| | | ||||| || | || | ||||||||| || Sbjct 41057 TCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT 41103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499632433791200