Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1909 107 2e-18 seq1672 102 8e-17 seq1536 100 3e-16 >seq1909 Length=49172 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 ||||| ||||||||||||||| | ||| || |||||| || || || || | | Sbjct 40709 TCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAA 40768 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTG 138542 || ||||| ||||||||||| || ||||| || ||||| ||| || || | |||| Sbjct 40769 ATGAGACGTTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGGATCTTCGACTTCACATTG 40828 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||| | ||||| ||||| | || | ||| ||||| || || ||||| || Sbjct 40829 -TCGATGGTGTCCGAGGACTCGACCTCCAGAGTAATCGTCTTACCCGTGAGGGTTTTGAC 40887 Query 138603 AAAAATCTGCATG 138615 |||||||||||| Sbjct 40888 GAAAATCTGCATG 40900 Score = 104 bits (114), Expect = 2e-17 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||||||||||||||||||| || || ||| ||||| | || || || | Sbjct 40478 GACTCCTTTTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCCAACTGCTTTCCAGCG 40537 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || | ||||||||||| || || || ||||| ||||| ||| | || | ||||| Sbjct 40538 AAAATCAATCGCTGTTGGTCTGGGGGGATTCCTTCCTTGTC-TTGAATCTTGGATTTAAC 40596 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | |||||| ||||| | ||| | || || || |||| ||| | Sbjct 40597 GTTG-TCGATTGTGTCTGACGACTCTACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCT 40655 Query 138599 TTACAAAAATCTGCATGGCT 138618 | || || ||||||||| || Sbjct 40656 TGACGAAGATCTGCATGCCT 40675 Score = 98.7 bits (108), Expect = 1e-15 Identities = 126/170 (74%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||| | ||| || ||||| ||||| || |||| | | Sbjct 40936 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCATCCTCAAGTTGCTTGCCGGCAAA 40995 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| |||||||||||||| ||||| || || || ||||| ||| | || | || | | Sbjct 40996 GATGAGACGCTGTTGGTCGGGAGGAATGCCCTCCTTGTC-CTGAATCTTCGACTTGACGT 41054 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGT 138590 || || | ||| ||| | ||||||||||||| || | || || ||||| Sbjct 41055 TG-TCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT 41103 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| || | ||| | || | ||| | | |||||||| || || |||||||| Sbjct 40216 GCCGCCACGAAGACGAAGCACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGA 40275 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || ||||| || || ||||| | |||| | ||||||||||| || || Sbjct 40276 CAAAGTCCGGCCATCCTCCAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGG 40335 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| | || | ||| | ||| || | ||||||| ||| || Sbjct 40336 AATACCCTCCTTGTC-TTGAATCTTGGATTTGACGTTG-TCGATCGTGTCGGACGATTCA 40393 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| || | ||||| || || ||||| || || || || ||||| Sbjct 40394 ACCTCGAGTGTAATTGTTTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 40443 >seq1672 Length=37181 Score = 102 bits (112), Expect = 8e-17 Identities = 337/516 (65%), Gaps = 11/516 (2%) Strand=Plus/Minus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCC 52385 || || ||| | ||||| ||||| | ||||| ||| ||||||| | | | | Sbjct 8701 GTCCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACTGACAAGAAGTCG 8642 Query 52386 ACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGC 52445 || | ||| |||| | || || ||||| | ||||||||| | || || ||| || Sbjct 8641 ACATTTGCCACGCGCCTTGTCGCTTTCGCTGTCGTCGAGGGCATCTTCTTCAGCGGT-GC 8583 Query 52446 TTT-GCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAA 52504 ||| ||| ||||||| | | || | | ||| | |||||||||||||| ||| || Sbjct 8582 TTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGCCTGACTTTCTCAAA 8523 Query 52505 CGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGAC 52564 |||| | || || || |||||||| || ||||| |||||||| || ||| | | | Sbjct 8522 CGAGCTCATCTCCCGTGACGAAGGCCTCCACACCGACTTTGCCTGTCTCCTGTTC---TC 8466 Query 52565 GCGCGTGACCGAAAAATTGGATTCGGACACGATCC-TGAGCATGTTCAAGGAGGCGGTGG 52623 || | ||| | | | ||| | ||| ||| |||| || || || Sbjct 8465 GCTCCTGAACAACAGGCCCAGCAAGGATATTGTCCAGGAGATTGTT-GTCGACGCTGTCA 8407 Query 52624 CTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGC 52683 || || | ||||| |||| | || |||| || || |||||||||||||| Sbjct 8406 AGATTGAGCAAGAGTTCCTTACAGAGGCTTTGCCCTGCGCCCTCCTGGGCATGAACGCCA 8347 Query 52684 AGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGC 52743 | ||| ||||||| |||||||| || || | || | || ||||| | Sbjct 8346 ACCTTATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTCGGAAACG 8287 Query 52744 CAAAGTACTTCAACGCTC--GCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGG 52801 ||| || | ||||| ||| || || || || ||| | |||||||| || | || Sbjct 8286 AGAAGGTCT--ACCGCTCCACCAACCCATTCGACTTCATGGAGAACATTTCACTGGGTGG 8229 Query 52802 CAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||||||||||| ||||||||||| || |||||||| Sbjct 8228 CAAGACCAACTTCTTCGAGAAGCGTGTAGGCGAGTA 8193 >seq1536 Length=70269 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||| || || | ||||||||| || || |||| | | Sbjct 29065 CTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCCGTCCTCGAGCTGCTTGCCGGCAAA 29124 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| | ||||| |||||||| || ||||| || ||||| ||| || || | ||| Sbjct 29125 GATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATT 29184 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||| ||| ||||||||||||| | || | || || || || || || || | Sbjct 29185 G-TCGATGGTATCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGA 29243 Query 138602 CAAAAATCTGCATG 138615 | || ||||||||| Sbjct 29244 CGAAGATCTGCATG 29257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496250117505600