Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1672 125 7e-24 seq1909 107 2e-18 >seq1672 Length=37181 Score = 125 bits (138), Expect = 7e-24 Identities = 344/517 (67%), Gaps = 19/517 (4%) Strand=Plus/Minus Query 47070 CCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACAT---TGAAAACGAAAACGTC 47126 |||||| | |||| |||||||| ||||| ||| || || ||| || ||| || | Sbjct 8698 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACTGACAA-GAAGTCGAC 8640 Query 47127 ACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGC 47186 | | ||| || | |||||||||| ||||||||||| |||||||| || || Sbjct 8639 ATTT--GCCACGCGCCTTGTCGCTTTCGCTGTCGTCGAGGGCATCTTCTTCAGCGGT-GC 8583 Query 47187 TTT-GCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAA 47245 ||| || | || || | | || | || | ||||||||||| || || || Sbjct 8582 TTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGCCTGACTTTCTCAAA 8523 Query 47246 CGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACAC 47305 |||||| ||||| | ||||||||||| |||||| |||||||||||||| | | | | Sbjct 8522 CGAGCTCATCTCCCGTGACGAAGGCCTCCACACCGACTTTGCCTGTCTCCTGTTCT-CGC 8464 Query 47306 TAGAGTCGATCAAAAGTTGGA-CGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCG 47364 | | | ||| || | | | | ||| || || ||| ||| || ||| Sbjct 8463 TCCTG---AACAACAGGCCCAGCAAGGATATTGTCCAGGAGATTGTTGTCGACGCTGTCA 8407 Query 47365 CCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGG 47424 |||||| ||||| | | |||||| ||||| | | |||| |||||||| Sbjct 8406 AGATTGAGCAAGAGTTCCTTACAGAGGCTTTGCCCTGCGCCCTCCTGGGCATGAACGCCA 8347 Query 47425 AGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCT---AAAGT 47481 | | |||| ||||||| || |||||||| ||| | || || || || ||| Sbjct 8346 ACCTTATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTCGGAAACG 8287 Query 47482 ATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGG 47541 | ||| | |||| | || || |||||||| || ||| | |||||||| || | | Sbjct 8286 AG---AAGGTCTACCGCTCCACCAACCCATTCGACTTCATGGAGAACATTTCACTGGGTG 8230 Query 47542 GCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 ||||||||||||| ||||||||||| || ||||| || Sbjct 8229 GCAAGACCAACTTCTTCGAGAAGCGTGTAGGCGAGTA 8193 >seq1909 Length=49172 Score = 107 bits (118), Expect = 2e-18 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||| || | ||||||||| |||||||| ||||| ||| || |||||| ||| || Sbjct 40463 ACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCC 40522 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | ||| ||||||||| | ||||||||||| || || || || || || ||||||| | || Sbjct 40523 AACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGGATTCCTTCCTTGT-CTTG 40581 Query 127025 ATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 | | | | || | |||| |||| ||||| | ||| || || | || | || | Sbjct 40582 AATCTTGGATTTAACGTTG-TCGATTGTGTCTGACGACTCTACCTCCAACGTGATGGTCT 40640 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 |||| |||| ||| || || || ||||||||| || Sbjct 40641 TGCCCGTCAAAGTCTTGACGAAGATCTGCATGCCT 40675 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||| | ||| | || ||||| || || |||||||| || || || || ||| || Sbjct 40234 CACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAAAGTCCGGCCATCCTC 40293 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || ||| ||||||| ||||| || || || || || ||||||||||| Sbjct 40294 CAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGGAATACCCTCCTTGTCTTG 40353 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 || || |||| |||| |||| ||||| | || || |||| || | |||| Sbjct 40354 AATCTTGGATTTGACGTTG-TCGATCGTGTCGGACGATTCAACCTCGAGTGTAATTGTTT 40412 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||| ||||| || || || || ||||| Sbjct 40413 TGCCGGTAAGAGTCTTGACGAAGATTTGCAT 40443 Score = 82.4 bits (90), Expect = 7e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||| | || | ||| ||| || ||||| ||||| ||| Sbjct 40901 CCACCGCGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTGTAGTCGGAA 40960 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || || || || || |||| | ||||| || |||||||| Sbjct 40961 AGAGTCCGGCCATCCTCAAGTTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCGGGAGGA 41020 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| || ||| ||||| |||| |||| ||| || || ||| || Sbjct 41021 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTG-TCGATGGTATCGCTAGACTCCAC 41079 Query 127066 TTCGACGGTCACCGTTTTGCCGGT 127089 |||| ||| | || ||||| || Sbjct 41080 CTCGAGGGTGATGGTCTTGCCAGT 41103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475489031355200