Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1909 134 3e-26 seq1536 109 1e-18 >seq1909 Length=49172 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || ||||||||||| | ||||||||| | ||| || | ||||| Sbjct 40460 AGGACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGACAACGTGCGCCCATCC 40519 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| ||||||||| ||||| || | ||||| ||||| || |||||||| || Sbjct 40520 TCCAACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGGATTCCTTCCTTGTCT 40579 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| || ||| |||| ||||||| | ||||| ||||||||||| ||| Sbjct 40580 TGAATCTTGGATTTAACGTTGTCGATTGTGTCTGACGACTCTACCTCCAACGTGATGGTC 40639 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | ||| || || || || || Sbjct 40640 TTGCCCGTCAAAGTCTTGACGAAGATCTG 40668 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||||| || |||||||||||||| |||| |||||||||| ||||||| Sbjct 40223 CGAAGACGAAGCACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAAAGTC 40282 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| ||||||||||| || |||||||| | ||||| ||||| || ||| || Sbjct 40283 CGGCCATCCTCCAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGGAATACCC 40342 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| || ||| |||| ||||| | | ||| || || | Sbjct 40343 TCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATCGTGTCGGACGATTCAACCTCGAGT 40402 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| || || || ||||| Sbjct 40403 GTAATTGTTTTGCCGGTAAGAGTCTTGACGAAGATTTG 40440 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || || ||||| || | ||||||||| | | ||||| || || Sbjct 40688 AGGACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCGTCC 40747 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||| |||||||| || |||||||| ||| || || || Sbjct 40748 TCAAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCCGGGGGAATACCCTCCTTGTCT 40807 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| |||||| | | || || |||| || |||||| Sbjct 40808 TGGATCTTCGACTTCACATTGTCGATGGTGTCCGAGGACTCGACCTCCAGAGTAATCGTC 40867 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| ||||| || ||||| || Sbjct 40868 TTACCCGTGAGGGTTTTGACGAAAATCTG 40896 Score = 113 bits (124), Expect = 1e-19 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||||||||| |||||| || | ||||||||| | | ||||| ||||| Sbjct 40916 AGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCATCC 40975 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| ||||| |||||||||||||| ||||| ||| ||| || || ||| Sbjct 40976 TCAAGTTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCGGGAGGAATGCCCTCCTTGTCC 41035 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| ||| || | | || || || | ||||| ||| Sbjct 41036 TGAATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTC 41095 Query 199598 TTACCCGTGA 199607 || || |||| Sbjct 41096 TTGCCAGTGA 41105 >seq1536 Length=70269 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || |||||||| || |||||| |||| ||||||||| | || ||| Sbjct 29036 CGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTC 29095 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || || || || |||||||| ||||| ||||| | |||||||||||||| || || Sbjct 29096 CTGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCC 29155 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| ||| || | | || || || | Sbjct 29156 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCGCTCGACTCCACCTCAAGG 29215 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| |||||||| || || || || || || Sbjct 29216 GTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTG 29253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178891692232660