Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1536 156 5e-33 seq1909 132 5e-26 seq46 113 5e-20 >seq1536 Length=70269 Score = 156 bits (172), Expect = 5e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||| || || | || |||||||| ||||| ||||||||||| || || | | Sbjct 29041 ACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCC 29100 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| ||||||||||||||||| || ||||||||||||||||| | || | | |||||| Sbjct 29101 GTCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTT 29160 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||||| | | | || |||||||| ||||| || | ||||| Sbjct 29161 GTCCTGGATCTTGGACTTGACATTGTCGATGGTATCGCTCGACTCCACCTCAAGGGTGAT 29220 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||||||| || || || || ||||| ||||| Sbjct 29221 AGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 29256 >seq1909 Length=49172 Score = 132 bits (146), Expect = 5e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| ||||||| || |||||| |||||||||||||| || | ||| || | Sbjct 40228 ACGAAGCACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAAAGTCCGGCC 40287 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || |||||||| || ||||| ||||||||||| ||||| | ||| | | |||||| Sbjct 40288 ATCCTCCAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGGAATACCCTCCTT 40347 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 ||| ||||| |||| ||| | | | ||||||| |||||| || || | || | Sbjct 40348 GTCTTGAATCTTGGATTTGA-CGTTGTCGATCGTGTCGGACGATTCAACCTCGAGTGTAA 40406 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||||||| || || || || || ||||||||||| Sbjct 40407 TTGTTTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 40443 Score = 118 bits (130), Expect = 1e-21 Identities = 140/187 (75%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || || | ||||||||||| || || ||||||||||| ||||| || | || || Sbjct 40918 CACGAGGTGGAGAGTACTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCATCCTC 40977 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 || ||||||||||| || || | ||||| ||||||| || | || |||||||||| Sbjct 40978 AAGTTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCGGGAGGAATGCCCTCCTTGTCCTG 41037 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 |||||| ||||| ||| | | | || ||||| || ||||| || | |||||||| | Sbjct 41038 AATCTTCGACTTGA-CGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCT 41096 Query 46563 TGCCCGT 46569 |||| || Sbjct 41097 TGCCAGT 41103 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||| | ||||| |||| ||| ||||||||| || ||||||||||| Sbjct 40445 CCTCCACGCAGACGGAGGACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGAC 40504 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | |||||| | || || | |||||| || ||||| ||||| ||||| ||||| | || Sbjct 40505 AACGTGCGCCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGG 40564 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | |||||||| ||||| || | ||| | | | ||||| ||| || || Sbjct 40565 ATTCCTTCCTTGTCTTGAATCTT-GGATTTAACGTTGTCGATTGTGTCTGACGACTCTAC 40623 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||||||| |||||||||| || || || ||||| ||||| Sbjct 40624 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 40671 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | |||| || | || || ||||| || || |||||||||| Sbjct 40671 TGCCTCCACGGAGACGAAGGACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAGTCGG 40730 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| || |||| || ||||||||||| ||||| || | || || ||||| | | Sbjct 40731 AAAGAGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCCGGGG 40790 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| ||||||| ||| | | | | ||||| || || | Sbjct 40791 GAATACCCTCCTTGTCTTGGATCTTCGACTTCACATTGTCGATGGTGTCCGAGGACTCGA 40850 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| || || || || ||||| || ||||| || || || ||||| Sbjct 40851 CCTCCAGAGTAATCGTCTTACCCGTGAGGGTTTTGACGAAAATCTGCAT 40899 >seq46 Length=8609 Score = 113 bits (124), Expect = 5e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| |||||||| |||| || ||||||||||| ||||| | Sbjct 2780 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGA 2839 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 | | ||||| ||||| | || | | |||||||||| |||||| ||| | | Sbjct 2840 TAAGACGCTGTTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTCACATTGT 2899 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | |||||| || || || |||| |||||||| ||||| ||||| || || || | Sbjct 2900 CGATCGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGA 2959 Query 46584 AG 46585 || Sbjct 2960 AG 2961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565224410349600