Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1672 140 3e-28 seq1909 123 2e-23 seq46 111 2e-19 seq1536 107 2e-18 >seq1672 Length=37181 Score = 140 bits (154), Expect = 3e-28 Identities = 204/285 (72%), Gaps = 5/285 (2%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| |||||||| ||| ||| || | || ||||| | ||||||||| ||| || || Sbjct 8811 GTATGTGTCGATCAGGAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAA 8870 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285 |||||| ||||| ||||||||| | ||| ||||| | || ||| ||||| ||||||| Sbjct 8871 GCCGTAGAAGCAGCGCGCCTCGGGAATCTGGACTTCG-GCGCTGAAGCGCTCAACCAGAT 8929 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | |||||||||||||| || |||||||| ||||| || | |||| |||||| | Sbjct 8930 TCTCGTTGACGATGCCATCCGAAGCGGCGAAGAAGGCGAGAATGTGCGAGATGAAGTACT 8989 Query 133346 GCTCGTTGTC---GTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402 | || | || | | | | ||||||| | ||||| |||| || | ||| | Sbjct 8990 GTTCATCTTCAGTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTAGACAAATCAATCTCTT 9049 Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACA 133447 | ||||||| || || |||||||| || |||||||| ||||| Sbjct 9050 CCGCGGTCCAGAATGAGGCCTCGGCCTTCTTGTACATCTGCCACA 9094 >seq1909 Length=49172 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| |||||||| || || || || | || |||||| || | Sbjct 40899 ATGCAGATTTTCGTCAAAACCCTCACGGGTAAGACGATTACTCTGGAGGTCGAGTCCTCG 40840 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| |||||| | |||||| Sbjct 40839 GACACCATCGACAATGTGAAGTCGAAGATCCAAGACAAGGAGGGTATTCCCCCGGACCAA 40780 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||||| ||| ||||| ||||| || |||| || || || |||||||||| Sbjct 40779 CAACGTCTCATTTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACTCTTTCCGACTACAAC 40720 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || |||||| || || || ||||| || ||| Sbjct 40719 ATTCAGAAGGAAAGCACCCTTCACTTGGTCCTTCGT 40684 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | |||||||| |||||||| | || || ||| | | Sbjct 40671 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTAGAGTCGTCA 40612 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| ||||| || || | ||||| || ||||| ||| | ||||| Sbjct 40611 GACACAATCGACAACG-TTAAATCCAAGATTCAAGACAAGGAAGGAATCCCCCCAGACCA 40553 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | |||| ||| || || ||| |||| || | |||||| | ||||||||| Sbjct 40552 ACAGCGATTGATTTTCGCTGGAAAGCAGTTGGAGGATGGGCGCACGTTGTCCGACTACAA 40493 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| |||||||| | |||||||| |||| || ||| || | || || Sbjct 40492 CATTCAAAAGGAGTCTACGCTGCACCTGGTCCTCCGTCTGCGTGGAGG 40445 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || |||||||| || || |||| || || | || Sbjct 40443 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAAACAATTACACTCGAGGTTGAATCGTCC 40384 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | ||| || || | ||||| ||||| ||||| | ||||| Sbjct 40383 GACACGATCGACAACG-TCAAATCCAAGATTCAAGACAAGGAGGGTATTCCGCCTGACCA 40325 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | |||||| || |||||||| || | || || | |||||||| Sbjct 40324 ACAGCGCTTGATCTTCGCGGGTAAGCAGCTGGAGGATGGCCGGACTTTGTCTGACTACAA 40265 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||| ||||| |||| |||||| | ||||| ||| | | ||||||| Sbjct 40264 TATCCAGAAGGAGTCGACTCTGCATCTTGTGCTTCGTCTTCGTGGCGGCC 40215 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| |||| || ||| | | ||| | | | | |||| | || Sbjct 41105 TCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACG-TCAAG 41047 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 || || | ||||| ||||| ||||| ||||||||||||| ||||| | || ||| Sbjct 41046 TCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAGCGTCTCATCTTTGCCGGC 40987 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 || || || || || | || || || |||||||||||| || ||||| Sbjct 40986 AAGCAACTTGAGGATGGCCGGACTCTTTCCGACTACAACATTCAGAAGGA 40937 >seq46 Length=8609 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || || ||||| ||||||||| | || |||||| || | |||| | Sbjct 2960 TTCGTGAAGACTCTGACTGGCAAGACCATCACCCTGGAGGTCGAGTCCTCGGACACGATC 2901 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| |||||||| ||| | ||||||||||| || Sbjct 2900 GACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAACAGCGTCTT 2841 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| ||||| || |||| ||||| || ||||||||||||||| ||| Sbjct 2840 ATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGACTACAACATCCAGAAG 2781 Query 38433 G 38433 | Sbjct 2780 G 2780 >seq1536 Length=70269 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| || |||||| | || || ||| | | | Sbjct 29256 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 29197 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || || |||| ||||| ||||| || ||| | ||||| Sbjct 29196 GATACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 29137 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | || ||||| ||||| || |||| | ||||| |||||||||| Sbjct 29136 CAGCGCTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCAGGACCCTGTCCGACTACAAC 29077 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||| || || || | ||||||||| || | || || Sbjct 29076 ATCCAGAAGGAGAGC-ACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 29030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500160420723200