Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1909 98.7 6e-16 seq1536 91.5 1e-13 >seq1909 Length=49172 Score = 98.7 bits (108), Expect = 6e-16 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| |||||||| ||||||||||| ||||| ||||| | || | || || Sbjct 40691 ACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCGTCCTCA 40750 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || ||||| ||||| | || | ||||||||||| Sbjct 40751 AGCTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGG 40810 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| || || || | ||||| || || ||| || || | || || || Sbjct 40811 ATCTTCGACTTCAC--AT--TGTCGATGGTGTCCGAGGACTCGACCTCCAGAGTAATCGT 40866 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || |||||||| || || || || |||||||| Sbjct 40867 CTTACCCGTGAGGGTTTTGACGAAAATCTGCAT 40899 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||| || | | || |||| |||||||| || || || || Sbjct 40253 TCCTTCTGGATATTGTAGTCAGACAAAGTCCGGCCATCCTCCAGCTGCTTACCCGCGAAG 40312 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || || ||||| |||| | ||||||||||| |||||| ||||||| Sbjct 40313 ATCAAGCGCTGTTGGTCAGGCGGAATACCCTCCTTGTCTTGAATCTTGGATTTGACGTTG 40372 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||||| |||| || || ||||| || || |||||||| || Sbjct 40373 TCGATCGTGTCGGACGATTCAACCTCGAGTGTAATTGTTTTGCCGGTAAGAGTCTTGACG 40432 Query 34971 AAGATCTGCATA 34982 ||||| |||||| Sbjct 40433 AAGATTTGCATA 40444 Score = 86.0 bits (94), Expect = 4e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 || || || ||||||||||| ||||| ||||| | || |||| || || || || ||| Sbjct 40931 GTACTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCATCCTCAAGTTGCTTGCCG 40990 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 ||||| || || || || ||||| | || | ||||||||||| ||||||| ||| Sbjct 40991 GCAAAGATGAGACGCTGTTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTG 41050 Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGA 34959 ||| | || | || | | ||| || |||| ||| ||||| || || |||| Sbjct 41051 ACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTGA 41105 >seq1536 Length=70269 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| ||||| || ||| | | | || || ||||| || ||| Sbjct 29060 GTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCCGTCCTCGAGCTGCTTGCCG 29119 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 ||||| || | || |||||||| | || | ||||||||||| ||||| ||| Sbjct 29120 GCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 29179 Query 34905 ACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || || | ||||| || | | ||| || || | ||| || || || |||||||| Sbjct 29180 AC--AT--TGTCGATGGTATCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAG 29235 Query 34961 AGTCTTCACAAAGATCTGCAT 34981 ||||| || ||||||||||| Sbjct 29236 GGTCTTGACGAAGATCTGCAT 29256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324625766185440