Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1909 111 1e-19 seq1536 82.4 6e-11 >seq1909 Length=49172 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| || ||||| ||| |||||||| ||||| || || | | || | || ||| Sbjct 40463 ACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCC 40522 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 |||||||| || || || |||| ||||||||| || | ||| | || |||||||| | Sbjct 40523 AACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGGATTCCTTCCTTGTCTTGA 40582 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| ||| || | | | ||||||| ||| ||||||| ||| || || || Sbjct 40583 ATCTTGGATTTAACGTTGTCGATTGTGTCTGACGACTCTACCTCCAACGTGATGGTCTTG 40642 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||||||||| || || || |||||||| Sbjct 40643 CCCGTCAAAGTCTTGACGAAGATCTGCAT 40671 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||||| || || ||||| ||||| || || ||| | || |||| || Sbjct 40691 ACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCGTCCTCA 40750 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || || || || ||||| |||| ||||| ||||||||||| Sbjct 40751 AGCTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGG 40810 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | || || | ||| ||||||| |||||||| || Sbjct 40811 ATCTTCGACTTCACATTGTCGATGGTGTCCGAGGACTCGACCTCCAGAGTAATCGTCTTA 40870 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | ||||| || ||||||||||| Sbjct 40871 CCCGTGAGGGTTTTGACGAAAATCTGCAT 40899 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 |||||| | || || | ||| | ||| || || ||| || || |||||||| ||||| Sbjct 40216 GCCGCCACGAAGACGAAGCACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGA 40275 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 | | | || | || |||| ||||||||| || || |||| |||||||| || | || Sbjct 40276 CAAAGTCCGGCCATCCTCCAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGG 40335 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || ||||||||||| |||||| ||| || | | | || |||| || || Sbjct 40336 AATACCCTCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATCGTGTCGGACGATTCAAC 40395 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| | ||||| ||||| || || | ||| || || || || ||||| Sbjct 40396 CTCGAGTGTAATTGTTTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 40443 >seq1536 Length=70269 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||| | || || |||||||| || || || ||||| || || || | | Sbjct 29039 AGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTG 29098 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| |||||||| |||| ||||| || |||| ||| | |||||| Sbjct 29099 CCGTCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCC 29158 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || ||||||||| | || Sbjct 29159 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCGCTCGACTCCACCTCAAGGGTG 29218 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| | || || || || |||||||| Sbjct 29219 ATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 29256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380928407499540