Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_019417.1 Length=59203 Score E Sequences producing significant alignments: (Bits) Value seq1069 161 4e-35 seq1047 125 3e-24 seq1064 111 6e-20 >seq1069 Length=856 Score = 161 bits (178), Expect = 4e-35 Identities = 272/392 (69%), Gaps = 4/392 (1%) Strand=Plus/Minus Query 44773 GAACTGCTCGTACGAAAGGCCGAGTGATGCGGCGATGTTCCTGAGCAACGATTCTTCATA 44832 |||||||||||| || ||||| || |||||| |||| | |||||||||||||| | Sbjct 742 GAACTGCTCGTAGGACAGGCCCAGGCCTGCGGCAATGTAGCGCAGCAACGATTCTTCGAA 683 Query 44833 ATCGGTTCCGACTCCGCCCGGCGTTCCTGCGGGCTGCATTTTCAGTTTCGTACCGGGGAA 44892 | ||||| || || || || || || ||||||||| ||| ||||| |||||| Sbjct 682 AGGCGTTCCAACACCACCGGGAGTCCCCATGGGCTGCATGCGCAGCTTCGTGTTGGGGAA 623 Query 44893 CAGGTGCGGGATTTTCGCCCCGTCGATTGCGATGTTTTTCGATCCGGCGATGTACTCGGC 44952 ||| |||||||| || || || || ||| ||| | | | ||||||| || Sbjct 622 CAGCTGCGGGATCTTGGCACCATCAATTTGAATGGCGCCGGCAGCACCCATGTACTGAGC 563 Query 44953 CAGACTCCCCATGTAGGTTTTCAGG--ATGTCGCCGAACGGCGTCTGTCCCATCCCCATC 45010 ||| || ||||||| | ||| | | | ||||| | ||||| || |||||| Sbjct 562 CAGCATCGACATGTAG--TCGTAGGCCACGGCACCGAAAGTGGTCTGACCTTGACCCATC 505 Query 45011 TGATTGAAGACCACGTCAGACGGCAATTCTGATTCGATGGCGGCCGCGTAGGTCGCGTTG 45070 | |||| || | ||||||||| ||||| | |||||| || || | ||||| Sbjct 504 GCAGCCGCAACCATATCGGCCGGCAATTCCGATTCCAGGGCGGCGGCATACGAGGCGTTT 445 Query 45071 ACGATGGCGTTTTGCAGCGTGACTTCCTGAAAGTTTCGGGTCATCTTCATCTGCTTCAAC 45130 || | ||||| |||| ||| || ||||| || || ||||||||| |||||||||| | Sbjct 444 ACCACCGCGTTCTGCAACGTCACGTCCTGGAAATTCTTGGTCATCTTGATCTGCTTCAGC 385 Query 45131 GCTGCGACCATTTCACTGATACCGCGAGTCTG 45162 | | ||||| || ||||| || |||||||| Sbjct 384 ACGGACACCATGTCGCTGATGCCACGAGTCTG 353 >seq1047 Length=3112 Score = 125 bits (138), Expect = 3e-24 Identities = 417/639 (65%), Gaps = 20/639 (3%) Strand=Plus/Plus Query 47539 GCAATGCGGACACGGCCATTTCCAGCGGCGGCGGTCGCCACGGTTGTACAGGCCGACAAT 47598 ||| ||||| || ||||| | ||||||||| || || |||||||| || || ||| ||| Sbjct 124 GCAGTGCGGGCAGGGCCAATACCAGCGGCGACGATCCCCACGGTTATAGAGCGCGAGAAT 183 Query 47599 CCCGTCACACGGCGGGGCTTCGTGGGGCGTG---CGCTTAATCCAGCTTGGGTCTTTAAT 47655 || ||||| || ||||| | || ||| ||||| | || || ||| Sbjct 184 GCCAGTGGTTGGCGGCGCCTCGTGCGCCGACGAACGC---ATCCACTTCGGATCAAGAAT 240 Query 47656 CGGGCGCGATGGCGATGACTCGGCTGCACA-CATGGCAAACGACCCGAAGGTCGTCGTAC 47714 || || || ||||| ||||| || | || ||| ||||| ||||| || || || | Sbjct 241 GGGTCGAGACGGCGACGACTCCGC-GAACGTCATTGCAAAGCTGCCGAACGTGGTGGTCC 299 Query 47715 GTTTTGATGCGAGGTCGAAGGCGTTACCGTCGCCGCCGATGTCGTCGTCAATACGGTCGT 47774 | |||| || | |||||| | ||| ||||||||| |||||||||||| || ||||||| Sbjct 300 GCTTTGCAGCCAAGTCGAACGGGTTGCCGTCGCCGTTGATGTCGTCGTCCATGCGGTCGT 359 Query 47775 AGTCGGTGATGATGATGCGACCAACGGGACGCCCGGCCAGTTCGGTTACTGACGGATAAC 47834 ||||||| | | ||||||| || ||||| | || || || ||||| | Sbjct 360 AGTCGGTCAGCACAGCACGACCAATTGGCTTACCGGCGAACTCAGTCACAGACGGCCACG 419 Query 47835 TCAACGTCAGGATGATGCCTGTGACGTAGTGTTTGTCGAATTTGTTGTCGGCGTCGCGGT 47894 ||||||||| | || || ||| |||| ||||||| ||| ||||| | ||| Sbjct 420 ACAACGTCAGCAGCATTCCGTTGATGTAGGTCTTGTCGAGAACGTTATCGGC--AGAGGT 477 Query 47895 TCTTCATCAGCAT---TTCGCCCACCTTCGGGCTATGGCGGTGAAGACGGTCTACTCGTC 47951 | || | || | ||| | | | ||| || ||| ||||| || | || | Sbjct 478 GC-CAATACGAATGTGCTTGCCGATGTCCTTGCTGTGAATGTGCAGACGATCAATACGAC 536 Query 47952 GCATCGAGAAGTCGCGCGCGGCCGTTGACGTCGGGCAGTAGACCATCAGATCCATCGGGT 48011 | | |||||| || || |||| | ||| ||||| | || |||||||| | Sbjct 537 GATTGCTGAAGTCTCGGGCCGCCGCCATAGATGGGTTATAGACAACCATGTCCATCGGTT 596 Query 48012 CAACTTTCACCGAATAGACAATGCTATTCAGGATCAGCGCATCGGTTTTACCGGACTGCG 48071 | | | || ||| | | || || | || | || |||||||| || ||||||| Sbjct 597 CGCATGTGACATGGTAGCCCACGCCGTTTACGACGATAGCGTCGGTTTTGCCCGACTGCG 656 Query 48072 CCGGGCCG-ACAAAG--GCCATCTTGTCGTACGCCCGGCTGTTCATCATGTTCATCGGCT 48128 |||| ||| | || | ||| | || ||| | ||||| | |||| ||||| Sbjct 657 CCGGCCCGCAGAACGCAGCCTTATTCACGT---CGCGGCTTGACCAAATGTCGCACGGCT 713 Query 48129 CGACCATGTACGGCGTCGTCGAGTTAAGCCAATCCCCGA 48167 | ||||||||||||||| || ||| ||| || |||| Sbjct 714 CAACCATGTACGGCGTCATCTCGTTCTTCCAGTCGCCGA 752 >seq1064 Length=1149 Score = 111 bits (122), Expect = 6e-20 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 44369 AGGCCCAAATCTTTGATGATGCCTTCTTCGCGGGCGCGCTGTTTGAATACTTCGCGGAAG 44428 ||||||| |||| ||| |||| |||||||| || |||||||| | |||||||| Sbjct 264 AGGCCCATTTCTTGGATCATGCGATCTTCGCGCTGACGTTGTTTGAAGATCTCGCGGAAA 205 Query 44429 TCCCCACCGAGGCGGGCGATTTCTGCTTCGTACGTTGACAGGCCATTCTTGATGCGAAGG 44488 || | || || || ||| ||| |||| | || |||||||| ||||||||| | Sbjct 204 TCTTCGCCCAGTCGTGCGCATTCCTTTTCGAAGGTAGACAGGCCCGACTTGATGCGCATC 145 Query 44489 ATAGCGGCTTCGGTTTCTTTCTTCTCGTCGATCTGGCCGCGACTCGCGCCGATCCA 44544 ||||| | | |||||| ||| ||||||||||||||| || | ||||||||||| Sbjct 144 ATAGCCGACTGGGTTTCCTTCAACTCGTCGATCTGGCCACGGCCGGCGCCGATCCA 89 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189323548425400