Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1451 109 2e-18 seq1730 105 2e-17 >seq1451 Length=73604 Score = 109 bits (120), Expect = 2e-18 Identities = 341/526 (65%), Gaps = 9/526 (2%) Strand=Plus/Minus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 ||||| ||| ||||| || || ||| || || | ||||||||||| || | | Sbjct 65921 ATCTCTGTGCAAAGGTTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTGCGG 65862 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || || |||||||| | ||| | ||| | || ||||| |||| || |||||||| Sbjct 65861 TTGCAGTGGTCCTTGTACAACATGAACGGGTTGCCAGTCTCGGTCTGAGCCTCCAGAATG 65802 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 |||||| | |||| || || |||| |||| || ||| || ||| Sbjct 65801 GAATACCAGAGCTTCTGGGCCTTGATAGTCTTGCGACCCTTGCCGGCCTGCTCGTACTTC 65742 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 ||||| | | | || |||||||| || || || |||||||||| | ||| Sbjct 65741 TCGTACAGAGCCTCGAACTCATCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTAGGG 65682 Query 155880 CAAAACAGCGACCAAATT---TTATTACCGATTACACGCTCCATAAATACATCACTCGCC 155936 || | ||| | ||| || || | | |||||| ||| || | |||| | Sbjct 65681 CACATCAGAGTCCAGTCGCCGTTCTTCTCAA---CACGCTTCATGAACAGATCAGGGATC 65625 Query 155937 CAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGC 155996 |||| ||| ||| || || | || |||||| | ||||| ||||||| || Sbjct 65624 CAAAGAGCGAGGAACAGATCGCGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTCAGG 65565 Query 155997 TCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---A 156053 || | ||| || | ||| | || ||||| || || || ||||| ||| | Sbjct 65564 TCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGA 65505 Query 156054 TTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGA 156113 | | ||||||||||| || || || ||||| || || |||||||||| ||||||||| Sbjct 65504 CGCTTGTTGCCACCCTGGTCGACGTAACGAGCCGTGTTGTTGAAGACACGCAGCATAGGA 65445 Query 156114 ATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAG 156159 | ||| ||||| || ||||| ||||| ||| |||| ||||||| Sbjct 65444 ACAATGCCATTCGAGGTGCCGTTGGTACCGGCGATATAGGAACCAG 65399 Score = 84.2 bits (92), Expect = 6e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 251482 GATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCG 251541 || ||||||| | ||||| |||||||||||||||||| || ||||| ||||| || ||| Sbjct 6607 GAGGCACCGTAGGCAATCAGACAATCACGCTCCATTTCTCCCAAACGCAGACCTCCGTCG 6548 Query 251542 CGAGCCCTACCCTCGGCAGGCTGACGAGT 251570 || | || |||||||| ||||| || || Sbjct 6547 CGCGACCGACCCTCGGTGGGCTGTCGGGT 6519 >seq1730 Length=59150 Score = 105 bits (116), Expect = 2e-17 Identities = 180/261 (69%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642 ||||| | ||| || ||||||||||| || | || || || |||||||| || || Sbjct 3950 CTTGACAAGACGTCGTTGAATATAACCCGTCTCGGCAGTCTTGACTGCTGTATCGATAAG 4009 Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAA 302702 ||| |||||||| |||| || |||||||| | ||| || || || | || | Sbjct 4010 ACCCTCACGACCAGCCATGGCGTGGAAGAAAAACTCGGAAGGAGTCAGGCCACGAAGGTA 4069 Query 302703 GGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAG 302762 || |||| || ||||| || |||||||| ||| ||| |||||| |||||||| || Sbjct 4070 CGAATTCTCTACAAAACCTCGGGCCTCGGGTGAAAAATCGTCCTTGGTGAAGTGTGGTAG 4129 Query 302763 GGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCA 302822 |||| | || ||||| | || |||||||| || || || | || || || | | Sbjct 4130 CGTCCGATACTTGAAGCCGAACGGAATACGCTTGCCTTCGACAATTTGTTGACCGACCAA 4189 Query 302823 CGAAATCATCTGCGAAATATT 302843 | | |||| || ||||| || Sbjct 4190 TGCAGTCATTTGAGAAATGTT 4210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471780261827260