Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_021780.1 Length=59454 Score E Sequences producing significant alignments: (Bits) Value seq1069 165 3e-36 seq1047 136 2e-27 >seq1069 Length=856 Score = 165 bits (182), Expect = 3e-36 Identities = 273/392 (70%), Gaps = 4/392 (1%) Strand=Plus/Minus Query 44689 GAACTGCTCGTACGAAAGGCCGAGTGATGCGGCGATGTTCCTGAGCAACGATTCTTCATA 44748 |||||||||||| || ||||| || |||||| |||| | |||||||||||||| | Sbjct 742 GAACTGCTCGTAGGACAGGCCCAGGCCTGCGGCAATGTAGCGCAGCAACGATTCTTCGAA 683 Query 44749 ATCGGTTCCGACTCCGCCCGGCGTTCCTGCGGGCTGCATTTTCAGTTTCGTACCGGGGAA 44808 | ||||| || || || || || || ||||||||| ||| ||||| |||||| Sbjct 682 AGGCGTTCCAACACCACCGGGAGTCCCCATGGGCTGCATGCGCAGCTTCGTGTTGGGGAA 623 Query 44809 CAGGTGCGGGATTTTCGCCCCGTCGATTGCGATGTTTTTCGATCCGGCGATGTACTCGGC 44868 ||| |||||||| || || || || ||| ||| | | | ||||||| || Sbjct 622 CAGCTGCGGGATCTTGGCACCATCAATTTGAATGGCGCCGGCAGCACCCATGTACTGAGC 563 Query 44869 CAGACTCCCCATGTAGGTTTTCAGG--ATGTCGCCGAAAGGCGTCTGTCCCATCCCCATC 44926 ||| || ||||||| | ||| | | | ||||||| ||||| || |||||| Sbjct 562 CAGCATCGACATGTAG--TCGTAGGCCACGGCACCGAAAGTGGTCTGACCTTGACCCATC 505 Query 44927 TGATTGAAGACCACGTCAGACGGCAATTCTGATTCGATGGCGGCCGCGTAGGTCGCGTTG 44986 | |||| || | ||||||||| ||||| | |||||| || || | ||||| Sbjct 504 GCAGCCGCAACCATATCGGCCGGCAATTCCGATTCCAGGGCGGCGGCATACGAGGCGTTT 445 Query 44987 ACGATGGCGTTTTGCAGCGTGACTTCCTGAAAGTTTCGGGTCATCTTCATCTGCTTCAAC 45046 || | ||||| |||| ||| || ||||| || || ||||||||| |||||||||| | Sbjct 444 ACCACCGCGTTCTGCAACGTCACGTCCTGGAAATTCTTGGTCATCTTGATCTGCTTCAGC 385 Query 45047 GCTGCGACCATTTCACTGATACCGCGAGTCTG 45078 | | ||||| || ||||| || |||||||| Sbjct 384 ACGGACACCATGTCGCTGATGCCACGAGTCTG 353 >seq1047 Length=3112 Score = 136 bits (150), Expect = 2e-27 Identities = 404/612 (66%), Gaps = 12/612 (2%) Strand=Plus/Plus Query 47455 GCAATGCGGACACGGCCATTTCCAGCGGCGGCGGTCGCCACGATTGTACAGCCCGACAAT 47514 ||| ||||| || ||||| | ||||||||| || || ||||| || || ||| ||| ||| Sbjct 124 GCAGTGCGGGCAGGGCCAATACCAGCGGCGACGATCCCCACGGTTATAGAGCGCGAGAAT 183 Query 47515 CCCATCACACGGCGGGGCTTCGTGCGGCGTACGCTTG-ATCCAGTTCGGGTCTTTAATCG 47573 ||| ||||| || ||||||| || ||| | ||||| ||||| || ||| | Sbjct 184 GCCAGTGGTTGGCGGCGCCTCGTGCGCCG-ACGAACGCATCCACTTCGGATCAAGAATGG 242 Query 47574 GGCGCGATGGCGATGACTCGGCCGCACA-CATGGCAAACGACCCGAAGGTCGTCGTACGT 47632 | || || ||||| ||||| || | || ||| ||||| ||||| || || || || Sbjct 243 GTCGAGACGGCGACGACTCCGC-GAACGTCATTGCAAAGCTGCCGAACGTGGTGGTCCGC 301 Query 47633 TTTGATGCGAGGTCGAAGGCGTTACCGTCGCCACCGATGTCGTCGTCGATACGGTCGTAG 47692 |||| || | |||||| | ||| |||||||| |||||||||||| || ||||||||| Sbjct 302 TTTGCAGCCAAGTCGAACGGGTTGCCGTCGCCGTTGATGTCGTCGTCCATGCGGTCGTAG 361 Query 47693 TCGGTGATGATGATTCGGCCAACGGGACGCCCGGCCAGTTCTGTTACTGACGGATAACTC 47752 ||||| | | || |||| || ||||| | || || || ||||| | | Sbjct 362 TCGGTCAGCACAGCACGACCAATTGGCTTACCGGCGAACTCAGTCACAGACGGCCACGAC 421 Query 47753 AACGTCAGGATGATGCCTGTGACGTAGTGTTTATCGAACTTGTTGTCGGCGTCGCGGTTC 47812 |||||||| | || || ||| |||| || |||| ||| ||||| | ||| | Sbjct 422 AACGTCAGCAGCATTCCGTTGATGTAGGTCTTGTCGAGAACGTTATCGGC--AGAGGTGC 479 Query 47813 TTCATCAGCAT---TTCGCCGACCTTCGGACTATGGCGGTGCAGACGGTCTACACGTCGC 47869 || | || | ||||| | | || || ||||||||| || | ||| || Sbjct 480 -CAATACGAATGTGCTTGCCGATGTCCTTGCTGTGAATGTGCAGACGATCAATACGACGA 538 Query 47870 ATCGAGAAGTCGCGCGCGGCCGTTGACGTCGGGCAGTAGATCATCAGATCCATCGGGTCA 47929 | |||||| || || |||| | ||| |||| | || |||||||| || Sbjct 539 TTGCTGAAGTCTCGGGCCGCCGCCATAGATGGGTTATAGACAACCATGTCCATCGGTTCG 598 Query 47930 ACTTTCACCGAATAGACAATGCTATTCAGGATCAGCGCATCGGTTTTACCGGACTGCGCC 47989 | | || ||| | | || || | || | || |||||||| || ||||||||| Sbjct 599 CATGTGACATGGTAGCCCACGCCGTTTACGACGATAGCGTCGGTTTTGCCCGACTGCGCC 658 Query 47990 GGGCCGACAAAAGCCATCTTGTCATACG-CCCGGCTGTTCATCATGTTCATCGGCTCAAC 48048 || ||| || || || | | ||| | ||||| | |||| ||||||||| Sbjct 659 GGCCCG-CAGAACGCAGCCTTATTCACGTCGCGGCTTGACCAAATGTCGCACGGCTCAAC 717 Query 48049 CATGTACGGCGT 48060 |||||||||||| Sbjct 718 CATGTACGGCGT 729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190126729540160