Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_021783.1 Length=59254 Score E Sequences producing significant alignments: (Bits) Value seq1069 167 9e-37 seq1047 129 2e-25 seq1064 111 6e-20 >seq1069 Length=856 Score = 167 bits (184), Expect = 9e-37 Identities = 298/433 (69%), Gaps = 4/433 (1%) Strand=Plus/Minus Query 44337 GCGCGGGCAGAAGAGTAGTTCGTCTTCGTATAGTCGCGGCTGAACTGCTCGTACGAAAGG 44396 ||||| || || |||||||| ||| | || || |||||||||||| || ||| Sbjct 783 GCGCGAGCGGACGAGTAGTTGACCTTGCTGTAATCCTTCGAGAACTGCTCGTAGGACAGG 724 Query 44397 CCGAGTGATGCGGCGATGTTCCTGAGCAACGATTCTTCATAATCGGTTCCGACTCCGCCC 44456 || || |||||| |||| | |||||||||||||| || ||||| || || || Sbjct 723 CCCAGGCCTGCGGCAATGTAGCGCAGCAACGATTCTTCGAAAGGCGTTCCAACACCACCG 664 Query 44457 GGCGTTCCTGCGGGCTGCATTTTCAGTTTCGTACCGGGGAACAGGTGCGGGATTTTCGCC 44516 || || || ||||||||| ||| ||||| ||||||||| |||||||| || || Sbjct 663 GGAGTCCCCATGGGCTGCATGCGCAGCTTCGTGTTGGGGAACAGCTGCGGGATCTTGGCA 604 Query 44517 CCGTCGATTGCGATGTTTTTCGATCCGGCGATGTACTCGGCCAGACTCCCCATGTAGGTT 44576 || || ||| ||| | | | ||||||| ||||| || ||||||| | Sbjct 603 CCATCAATTTGAATGGCGCCGGCAGCACCCATGTACTGAGCCAGCATCGACATGTAG--T 546 Query 44577 TTCAGG--ATGTCGCCGAAAGGCGTCTGTCCCATCCCCATCTGATTGAAGACCACGTCAG 44634 ||| | | | ||||||| ||||| || |||||| | |||| || | Sbjct 545 CGTAGGCCACGGCACCGAAAGTGGTCTGACCTTGACCCATCGCAGCCGCAACCATATCGG 486 Query 44635 ACGGCAATTCGGATTCGATGGCGGCCGCGTAGGTCGCGTTGACGATGGCGTTTTGCAGCG 44694 ||||||||| ||||| | |||||| || || | ||||| || | ||||| |||| || Sbjct 485 CCGGCAATTCCGATTCCAGGGCGGCGGCATACGAGGCGTTTACCACCGCGTTCTGCAACG 426 Query 44695 TGACTTCCTGAAAGTTTCGGGTCATCTTCATCTGCTTCAACGCTGCGACCATTTCACTGA 44754 | || ||||| || || ||||||||| |||||||||| | | | ||||| || |||| Sbjct 425 TCACGTCCTGGAAATTCTTGGTCATCTTGATCTGCTTCAGCACGGACACCATGTCGCTGA 366 Query 44755 TACCGCGAGTCTG 44767 | || |||||||| Sbjct 365 TGCCACGAGTCTG 353 >seq1047 Length=3112 Score = 129 bits (142), Expect = 2e-25 Identities = 418/639 (65%), Gaps = 20/639 (3%) Strand=Plus/Plus Query 47144 GCAATGCGGACACGGCCATTTCCAGCGGCGGCGGTCGCCACGGTTGTACAGGCCGACAAT 47203 ||| ||||| || ||||| | ||||||||| || || |||||||| || || ||| ||| Sbjct 124 GCAGTGCGGGCAGGGCCAATACCAGCGGCGACGATCCCCACGGTTATAGAGCGCGAGAAT 183 Query 47204 CCCGTCACACGGCGGGGCTTCGTGGGGCGTG---CGCTTAATCCAGCTTGGGTCTTTAAT 47260 || ||||| || ||||| | || ||| ||||| | || || ||| Sbjct 184 GCCAGTGGTTGGCGGCGCCTCGTGCGCCGACGAACGC---ATCCACTTCGGATCAAGAAT 240 Query 47261 CGGGCGCGATGGCGATGACTCGGCTGCACA-CATGGCAAACGACCCGAAGGTCGTCGTAC 47319 || || || ||||| ||||| || | || ||| ||||| ||||| || || || | Sbjct 241 GGGTCGAGACGGCGACGACTCCGC-GAACGTCATTGCAAAGCTGCCGAACGTGGTGGTCC 299 Query 47320 GTTTTGATGCGAGGTCGAAGGCGTTACCGTCGCCGCCGATGTCGTCGTCAATACGGTCGT 47379 | |||| || | |||||| | ||| ||||||||| |||||||||||| || ||||||| Sbjct 300 GCTTTGCAGCCAAGTCGAACGGGTTGCCGTCGCCGTTGATGTCGTCGTCCATGCGGTCGT 359 Query 47380 AGTCGGTGATGATGATGCGACCAACGGGACGCCCGGCCAGTTCGGTTACTGACGGATAAC 47439 ||||||| | | ||||||| || ||||| | || || || ||||| | Sbjct 360 AGTCGGTCAGCACAGCACGACCAATTGGCTTACCGGCGAACTCAGTCACAGACGGCCACG 419 Query 47440 TCAACGTCAGGATGATGCCTGTGACGTAGTGTTTGTCGAATTTGTTGTCGGCGTCGCGGT 47499 ||||||||| | || || ||| |||| ||||||| ||| ||||| | ||| Sbjct 420 ACAACGTCAGCAGCATTCCGTTGATGTAGGTCTTGTCGAGAACGTTATCGGC--AGAGGT 477 Query 47500 TCTTCATCAGCAT---TTCGCCCACCTTCGGGCTATGGCGGTGAAGACGGTCTACACGTC 47556 | || | || | ||| | | | ||| || ||| ||||| || | ||| | Sbjct 478 GC-CAATACGAATGTGCTTGCCGATGTCCTTGCTGTGAATGTGCAGACGATCAATACGAC 536 Query 47557 GCATCGAGAAGTCGCGCGCGGCCGTTGACGTCGGGCAGTAGACCATCAGATCCATCGGGT 47616 | | |||||| || || |||| | ||| ||||| | || |||||||| | Sbjct 537 GATTGCTGAAGTCTCGGGCCGCCGCCATAGATGGGTTATAGACAACCATGTCCATCGGTT 596 Query 47617 CAACTTTCACCGAATAGACAATGCTATTCAGGATCAGCGCATCGGTTTTACCGGACTGCG 47676 | | | || ||| | | || || | || | || |||||||| || ||||||| Sbjct 597 CGCATGTGACATGGTAGCCCACGCCGTTTACGACGATAGCGTCGGTTTTGCCCGACTGCG 656 Query 47677 CCGGGCCG-ACAAAG--GCCATCTTGTCGTACGCCCGGCTGTTCATCATGTTCATCGGCT 47733 |||| ||| | || | ||| | || ||| | ||||| | |||| ||||| Sbjct 657 CCGGCCCGCAGAACGCAGCCTTATTCACGT---CGCGGCTTGACCAAATGTCGCACGGCT 713 Query 47734 CGACCATGTACGGCGTCGTCGAGTTAAGCCAATCCCCGA 47772 | ||||||||||||||| || ||| ||| || |||| Sbjct 714 CAACCATGTACGGCGTCATCTCGTTCTTCCAGTCGCCGA 752 >seq1064 Length=1149 Score = 111 bits (122), Expect = 6e-20 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 43974 AGGCCCAAATCTTTGATGATGCCTTCTTCGCGGGCGCGCTGTTTGAATACTTCGCGGAAG 44033 ||||||| |||| ||| |||| |||||||| || |||||||| | |||||||| Sbjct 264 AGGCCCATTTCTTGGATCATGCGATCTTCGCGCTGACGTTGTTTGAAGATCTCGCGGAAA 205 Query 44034 TCGCCACCGAGGCGGGCGATTTCTGCTTCGTACGTTGACAGGCCATTCTTGATGCGAAGG 44093 || | || || || ||| ||| |||| | || |||||||| ||||||||| | Sbjct 204 TCTTCGCCCAGTCGTGCGCATTCCTTTTCGAAGGTAGACAGGCCCGACTTGATGCGCATC 145 Query 44094 ATAGCGGCTTCGGTTTCTTTCTTCTCGTCGATCTGGCCGCGACTCGCGCCGATCCA 44149 ||||| | | |||||| ||| ||||||||||||||| || | ||||||||||| Sbjct 144 ATAGCCGACTGGGTTTCCTTCAACTCGTCGATCTGGCCACGGCCGGCGCCGATCCA 89 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189486744588160