Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1909 89.7 4e-13 seq1309 86.0 5e-12 >seq1909 Length=49172 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| ||||| || ||||| ||||| || | || ||| | Sbjct 40671 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTAGAGTCGTCA 40612 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || ||| |||||| ||||| ||||| | ||| || ||| Sbjct 40611 GACACAATCGACAACGTTAAATCCAAGATTCAAGACAAGGAAGGAATCCCCCCAGACCAA 40552 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || | |||| || || || ||| ||||||||| | || || | || |||||| Sbjct 40551 CAGCGATTGATTTTCGCTGGAAAGCAGTTGGAGGATGGGCGCACGTTGTCCGACTACAAC 40492 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| || |||||| ||||| |||| | | ||||| || || Sbjct 40491 ATTCAAAAGGAGTCTACGCTGCACCTGGTCCTCCGTCTGCGTGGAGG 40445 >seq1309 Length=78646 Score = 86.0 bits (94), Expect = 5e-12 Identities = 200/297 (67%), Gaps = 6/297 (2%) Strand=Plus/Plus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 ||||| || ||||| ||||| | || | | || | ||||||||| |||||| || Sbjct 67104 GATGACATCTGTCTCGGGGTTCTTGCACTTCTTGCAAAGAACAAACTTGTTGATGAACCC 67163 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 || || |||||| | ||| | | ||||| | ||||||| ||| | || |||| Sbjct 67164 GTCGAGGTAGTCCTGAAGCTTTGCAGCATCGTGAGCTCCGTTGATGATCCAACGGTCGTC 67223 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 | ||| | | || || || || ||||| | || |||||||| | |||| Sbjct 67224 GGCGGGATCAATGTTGGTCTGGGCACCGAGCTCAAAGCCAAAGTACTTGATAAGGTAGGC 67283 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATT-TCGGGCATGTTGACGATGACAGTCTTGATGC 34549 | ||||| | || | || |||| ||| | | |||||||| || |||||||| | Sbjct 67284 TCCAGGACGAGCGAGAGACTGAGCGACGCTCGTG-AGGTTGACGACAACGGTCTTGATTC 67342 Query 34550 CGTTGCCCTTTCCTTCGACCTTGG--CGCAGATGCGCGGCATTTTGTAGCGGTAGAA 34604 |||||||||| || |||| ||||| |||| |||| ||| ||||| || ||||| Sbjct 67343 CGTTGCCCTTACCCTCGATCTTGGTCTGCAG--GCGCTCCATCTTGTAACGATAGAA 67397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412831637616140