Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1909 105 2e-17 >seq1909 Length=49172 Score = 105 bits (116), Expect = 2e-17 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || ||||| ||||| || || || ||| Sbjct 40668 CAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTAGAGTCGTCAGAC 40609 Query 206233 ACAGTCGA-ATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| |||| | | |||| | || ||||||||| || |||||||| || ||| || Sbjct 40608 ACAATCGACAACGTTAAATCCAA-GATTCAAGACAAGGAAGGAATCCCCCCAGACCAACA 40550 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || | || ||||| |||||||||||||| ||||| | || ||| |||| |||||| | Sbjct 40549 GCGATTGATTTTCGCTGGAAAGCAGTTGGAGGATGGGCGCACGTTGTCCGACTACAACAT 40490 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378 || || |||||||| || ||||| || Sbjct 40489 TCAAAAGGAGTCTACGCTGCACCTGGT 40463 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || ||||| || || | || || ||| || ||||| |||| Sbjct 40429 CAAGACTCTTACCGGCAAAACAATTACACTCGAGGTTGAATCGTCCGACACGATCGACAA 40370 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || ||||||||||| || || || ||| ||| ||| || | | ||||| Sbjct 40369 CGTCAAATCCAAGATTCAAGACAAGGAGGGTATTCCGCCTGACCAACAGCGCTTGATCTT 40310 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||| |||| ||||| |||||||| | || ||||| ||||||| ||||| Sbjct 40309 CGCGGGTAAGCAGCTGGAGGATGGCCGGACTTTGTCTGACTACAATATCCAGAAGGAGTC 40250 Query 206364 TACTCTTCACCTTGT 206378 ||||| || ||||| Sbjct 40249 GACTCTGCATCTTGT 40235 Score = 95.1 bits (104), Expect = 3e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||| || ||||| ||||| ||||||| ||| ||||||| |||||||| ||||| ||| Sbjct 40235 ACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAAAGTCCGGCCATCCTCC 40294 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| || |||||||| | || ||||| Sbjct 40295 AGCTGCTTACCCGCGAAGATCAAGCGCTGTTG 40326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181790818683580