Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04]
1,980 sequences; 42,710,978 total letters
Query= NC_025442.1
Length=59578
Score E
Sequences producing significant alignments: (Bits) Value
seq1069 179 1e-40
seq1047 136 2e-27
seq1064 111 6e-20
>seq1069
Length=856
Score = 179 bits (198), Expect = 1e-40
Identities = 276/392 (70%), Gaps = 4/392 (1%)
Strand=Plus/Plus
Query 14431 CAGACTCGCGGTATCAGTGAAATGGTCGCCGCGTTGAAGCAGATGAAGATGACCAGAAAC 14490
|||||||| || ||||| || ||||| ||| | |||||||||| |||||||||| ||
Sbjct 353 CAGACTCGTGGCATCAGCGACATGGTGTCCGTGCTGAAGCAGATCAAGATGACCAAGAAT 412
Query 14491 TTTCAGGAAGTCACGCTGCAAAACGCCATTGTCAACGCGACCTACGCTGCGGCCATCGAA 14550
|| ||||| || ||| |||| ||||| | || ||||| | || || || ||| | |||
Sbjct 413 TTCCAGGACGTGACGTTGCAGAACGCGGTGGTAAACGCCTCGTATGCCGCCGCCCTGGAA 472
Query 14551 TCCGAATTGCCGTCGGACGTGGTCTTCAATCAGATGGGTATGGGGCAGACGCCTTTCGGC 14610
|| ||||||||| | || |||| | ||||||| || ||||| |||||||
Sbjct 473 TCGGAATTGCCGGCCGATATGGTTGCGGCTGCGATGGGTCAAGGTCAGACCACTTTCGGT 532
Query 14611 GACAT--CCTGAAAACCTACATGGGGAGTCTGGCCGAGTACATCGCCGGATCGAAAAACA 14668
| | | ||| | ||||||| || ||||| ||||||| | | | ||
Sbjct 533 GCCGTGGCCTACGA--CTACATGTCGATGCTGGCTCAGTACATGGGTGCTGCCGGCGCCA 590
Query 14669 TTGCAATCGACGGGGCGAAAATCCCGCACCTGTTCCCCGGTACGAAACTGAAAATGCAGC 14728
|| ||| || || || || |||||||| ||||||||| ||||| ||| |||||||
Sbjct 591 TTCAAATTGATGGTGCCAAGATCCCGCAGCTGTTCCCCAACACGAAGCTGCGCATGCAGC 650
Query 14729 CCGCAGGAACGCCGGGCGGAGTCGGAACCGATTATGAAGAATCGTTGCTCAGGAACATCG 14788
|| || || || || || || ||||| || |||||||||||||| | |||| |
Sbjct 651 CCATGGGGACTCCCGGTGGTGTTGGAACGCCTTTCGAAGAATCGTTGCTGCGCTACATTG 710
Query 14789 CCGCATCACTCGGCCTTTCGTACGAGCAGTTC 14820
||||| || ||||| || ||||||||||||
Sbjct 711 CCGCAGGCCTGGGCCTGTCCTACGAGCAGTTC 742
>seq1047
Length=3112
Score = 136 bits (150), Expect = 2e-27
Identities = 243/351 (69%), Gaps = 8/351 (2%)
Strand=Plus/Minus
Query 11707 GCCGACAACAAATTCGATAAGCACTACATTACCGGGATCATCCTGACGTTGAGTTATCCG 11766
||||| ||| |||| ||| |||||| | ||| || | ||||||||| | |||
Sbjct 471 GCCGATAACGTTCTCGACAAGACCTACATCAACGGAATGCTGCTGACGTTGTCGTGGCCG 412
Query 11767 TCAGTAACCGAACTGGCGGGCCGTCCGGTTGGCCGTATCATCATCACCGACTATGACCGC 11826
|| || || || | || || || |||| ||| | | |||||||| ||||||
Sbjct 411 TCTGTGACTGAGTTCGCCGGTAAGCCAATTGGTCGTGCTGTGCTGACCGACTACGACCGC 352
Query 11827 ATCGACGACGACATCGGCGGCGACGGTAACGCCTTCGACCTCGCATCAAAACGTACGACG 11886
|| |||||||||||| ||||||||| ||| | |||||| | || |||| || || ||
Sbjct 351 ATGGACGACGACATCAACGGCGACGGCAACCCGTTCGACTTGGCTGCAAAGCGGACCACC 292
Query 11887 ACCTTCGGGTCGTTTGCCATG-TGTGCGGCCGAGTCATCACCCTCCCGTCCGATTAAAGA 11945
|| ||||| ||||| ||| || | || ||||| || || || || || ||| ||
Sbjct 291 ACGTTCGGCAGCTTTGCAATGACGTTC-GCGGAGTCGTCGCCGTCTCGACCCATTCTTGA 233
Query 11946 CCCGAACTGGATTAAGCGT---ACGCCGCACGAAGCCCCACCATGCGACGGGATTGTCGG 12002
||||| ||||| |||| || ||||||| || || ||| | || ||| |||
Sbjct 232 TCCGAAGTGGAT---GCGTTCGTCGGCGCACGAGGCGCCGCCAACCACTGGCATTCTCGC 176
Query 12003 GTTATACAACCGTGGCGACCGCCGACGCTGGAAATGGCCGTGTCCGCATTG 12053
| | || |||||||| || || || |||||| | ||||| || ||||| ||
Sbjct 175 GCTCTATAACCGTGGGGATCGTCGCCGCTGGTATTGGCCCTGCCCGCACTG 125
>seq1064
Length=1149
Score = 111 bits (122), Expect = 6e-20
Identities = 130/176 (74%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 15049 TGGATCGGCGCGAGTCGCGGCCAGATCGACGAGAAGAAAGAAACCGAAGCCGCTATCCTT 15108
||||||||||| | || ||||||||||||||| ||| |||||| | | ||||| |
Sbjct 89 TGGATCGGCGCCGGCCGTGGCCAGATCGACGAGTTGAAGGAAACCCAGTCGGCTATGATG 148
Query 15109 CGCATCAAGAATGGCCTGTCAACGTACGAAGCAGAAATCGCCCGCCTCGGTGGGGACTTC 15168
||||||||| |||||||| || | |||| ||| ||| || || || | || |||
Sbjct 149 CGCATCAAGTCGGGCCTGTCTACCTTCGAAAAGGAATGCGCACGACTGGGCGAAGATTTC 208
Query 15169 CGCGAAGTATTCAAACAGCGCGCCCGCGAAGAAGGCATCATCAAAGATTTGGGCCT 15224
||||| | |||||||| || |||||||| |||| ||| |||| |||||||
Sbjct 209 CGCGAGATCTTCAAACAACGTCAGCGCGAAGATCGCATGATCCAAGAAATGGGCCT 264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190523520210400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |