Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_027348.1 Length=73990 Score E Sequences producing significant alignments: (Bits) Value seq1048 136 2e-27 seq1452 82.4 4e-11 >seq1048 Length=2061 Score = 136 bits (150), Expect = 2e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 63695 AAAGCCGATGAAGTAATGGACCTCGCTCA-GCGGGTAGTTCAGCAGATTGGTGGCTGCAT 63753 ||| ||| ||||||| || ||| || ||| |||| || ||| || || || | Sbjct 1181 AAAACCGGTGAAGTAGTGAACCACG-TCACGCGGATAACCAAGCTTGTTCTGTGCGGCGT 1239 Query 63754 CGAACGTCTTGGGCACCAGCTCGATATCCCCGGCAATGATCCAGTCGTAGTCCTCAATCT 63813 |||||||| || ||||| |||| ||||| ||||||||||||||||| || |||| Sbjct 1240 CGAACGTCAGAGGAACCAGGTCGAGCCGGCCGGCGATGATCCAGTCGTAGTCTTCGATCT 1299 Query 63814 GCACGAAGTCGTAGTTGGGGTAGCTCCACTCGGCAATGGGGAAGTTCAGCCGGTAGGTCA 63873 ||||||||||||||||||| |||| | || | |||||||||| || || | Sbjct 1300 GCACGAAGTCGTAGTTGGGCGTCTTCCAGTGATCAGTCGGGAAGTTCATGATGTTCGTGA 1359 Query 63874 GCTCCGACGCCGGGCTCATGATCTGCGGGGTAAAGAACAGCAGCGTGGC 63922 | || || ||||| |||||||||||| || ||||||||||||||||| Sbjct 1360 GATCGGATGCCGGCGACATGATCTGCGGCGTGAAGAACAGCAGCGTGGC 1408 Score = 104 bits (114), Expect = 1e-17 Identities = 174/247 (70%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 63944 CTTCACCCGGTCACGGATGTAGTTGGTGCTGTCCCCCAGCTTCTTTCGCAGCCAGTCCAC 64003 || |||| | || ||||||| ||| || | | |||||||| | |||| ||| || | Sbjct 1478 CTGCACCAGATCTCGGATGTGGTTTGTCGAGGCTCCCAGCTTGTCGCGCAACCACTCGGC 1537 Query 64004 ATACGGCCACTGGTTGCTGGC--CACCGGGTCGAAGATGCTTTTGATGTAGGGAGTCGGC 64061 || | | || | | ||| || ||| ||||||||| ||| ||| |||| |||||| Sbjct 1538 GTATG--CGATGTTCTCCGGCGTCAGCGGCTCGAAGATGTTTTCGATCCAGGGCGTCGGC 1595 Query 64062 ACCTGGTTGCCGGTCTCGGCCTCGTACAGGACCATCGTCGCA-GGATCGTACAGGCAGGG 64120 ||| | |||||| || ||| ||| | | || || | | || ||||| | ||| || Sbjct 1596 ACCGGCAGGCCGGTTTCAAGCTCATACTG-AGCAACGGTGTACGGGTCGTAGATGCAAGG 1654 Query 64121 TGCATTCTTCCCTTCCCCGGTCGAGTAGCTGCCGTCCCACCACCATGGTTCGCCGATCTG 64180 ||| ||| || | || ||| |||||||||||||||||||| || || |||||||| Sbjct 1655 TGCGAACTTGCCCACGCCTTCCGAATAGCTGCCGTCCCACCACCACGGCTCCCCGATCTG 1714 Query 64181 GAACAGC 64187 |||||| Sbjct 1715 AAACAGC 1721 >seq1452 Length=168077 Score = 82.4 bits (90), Expect = 4e-11 Identities = 73/89 (82%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 21954 CTGCAAACTCTATCAGCGCA-GCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCA 22012 |||| | ||||| ||||| | || |||||| |||||||||||||||||| || |||| Sbjct 36405 CTGCCAGCTCTACCAGCGGTCGTGC-GACATGGGCCTGGGCGTGCCCTTCAATATTGCCA 36347 Query 22013 GCTACGCGCTGCTGACGCACCTCATGGCG 22041 ||||||||||| |||||||| | || ||| Sbjct 36346 GCTACGCGCTGTTGACGCACATGATCGCG 36318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236637489503780