Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1629 149 2e-30 seq1909 98.7 3e-15 >seq1629 Length=43522 Score = 149 bits (164), Expect = 2e-30 Identities = 438/672 (65%), Gaps = 15/672 (2%) Strand=Plus/Minus Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || ||||| ||||| || |||||| | ||||| || || | ||| || || || || || Sbjct 15046 ATTATTGCCAATGACCAGGGTAACCGCACAACCCCGTCCTTCGTGGCGTTCACGGATACC 14987 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 |||||| |||| || ||| | || || || || | ||| || || | || || || Sbjct 14986 GAGCGTCTGATCGGAGATGCGGCCAAGAACCAGGTCGCTATGAACCCCCACAACACCGTC 14927 Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAATCTGA 349440 || || || ||| | | |||||| | | || || ||| | || || | || Sbjct 14926 TTCGACGCGAAGAGGTTGATTGGTCGCAAGTTCTCCGACGCCGAGGTC----CAGGCCGA 14871 Query 349441 TCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGT--GATAAACCAATTATTGAG 349498 | || || || || || | || ||| ||| ||| | || || | |||||| Sbjct 14870 CATGAAGCACTTCCCCTTCAAGGTCGTTG----AGA-GGTCCGGCAAGCCCGTCATTGAG 14816 Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558 ||||| | || || || ||| || || || || || || || || ||||| || Sbjct 14815 GTTGAGTTCAAGGGAGAGACAAAGCAGTTCACTCCTGAGGAGATCTCCTCCATGGTCTTG 14756 Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618 || ||| || | |||||| | || | |||| || || | | |||||| | Sbjct 14755 ACCAAGATGCGTGAGACTGCTGAGTCTTACCTTGGTGGCACCGTCAACAACGCTGTTGTC 14696 Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 || || || || || || || || | |||||| || || || ||||| || ||| Sbjct 14695 ACCGTCCCCGCATACTTCAACGACTCACAGCGTCAGGCCACCAAGGATGCCGGTCTCATC 14636 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 || || | || || || | || ||||| || || ||||| || || || || ||||| Sbjct 14635 GCTGGTCTGAACGTCCTCCGTATCATTAACGAGCCTACTGCCGCTGCCATCGCCTATGGT 14576 Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 ||||| || | | || || || | || ||||| ||| | |||||||||||| Sbjct 14575 CTTGACAAGAAGGTCGAGGGTGAGCGCAACGTGCTGATTTTCGATCTTGGTGGTGGTACT 14516 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 || ||||| || || || || | || ||||| || || || || || | ||||| ||| Sbjct 14515 TTCGATGTGTCGCTCCTTACCATCGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCCGGT 14456 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918 || || || | ||||| || || ||||| || ||||| || | || || | ||| ||| Sbjct 14455 GACACCCACTTGGGTGGTGAGGACTTTGACAACCGTCTGGTCACTCACTTCGCTAACGAA 14396 Query 349919 TTTAAGCGTCAA 349930 || |||||| || Sbjct 14395 TTCAAGCGTAAA 14384 >seq1909 Length=49172 Score = 98.7 bits (108), Expect = 3e-15 Identities = 149/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 140527 GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTT 140586 || |||| ||||| || || || ||||| || || || || | || || || || | Sbjct 40690 GACCAAG-TGAAGGGTGCTTTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCGTCCT 40748 Query 140587 CAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCT 140646 |||| || || ||||| || || |||||||| || || || ||||| || || || || | Sbjct 40749 CAAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCCGGGGGAATACCCTCCTTGTCTT 40808 Query 140647 GAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCT 140706 | || || | || ||||| || || | || || | || || || || |||| |||| Sbjct 40809 GGATCTTCGACTTCACATTGTCGATGGTGTCCGAGGACTCGACCTCCAGAGTAATCGTCT 40868 Query 140707 TTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || ||||| || ||||||||||| Sbjct 40869 TACCCGTGAGGGTTTTGACGAAAATCTGCAT 40899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515215959889940