Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_028812.1 Length=58546 Score E Sequences producing significant alignments: (Bits) Value seq1047 141 3e-29 >seq1047 Length=3112 Score = 141 bits (156), Expect = 3e-29 Identities = 361/546 (66%), Gaps = 14/546 (3%) Strand=Plus/Plus Query 49461 CAGTGAGGGCACGGCCATTGCCAACGTCGTCTATCGCCACGGTTGTAAAGCGCAATGATA 49520 ||||| ||||| ||||| | ||| || || | ||| |||||||| || ||||| | || Sbjct 125 CAGTGCGGGCAGGGCCAATACCAGCGGCGACGATCCCCACGGTTATAGAGCGCGAGAATG 184 Query 49521 CCGGTACACGGCGGAGCCTCATGCGGTGACTTAGCTATCCAGTGCGGGTCAAGAATCTCT 49580 || || ||||| ||||| |||| ||| | ||||| | ||| |||||||| | Sbjct 185 CCAGTGGTTGGCGGCGCCTCGTGCGCCGACGAACGCATCCACTTCGGATCAAGAATGGGT 244 Query 49581 CTCGACGGGGACGATTCGGCCATTGTCATAGCAAACGAACCAAAGGTCGTTGTACGCTGT 49640 | ||||| ||||| || || | ||||| ||||| || || || || || |||| | Sbjct 245 CGAGACGGCGACGACTCCGCGAACGTCATTGCAAAGCTGCCGAACGTGGTGGTCCGCTTT 304 Query 49641 GTTGCCAAGTCAAAAGGATTACCATCACCGCCGATATCGTCGTCCATACGGTCAAAGTCG 49700 | |||||||| || || || || || ||| ||| ||||||||||| ||||| ||||| Sbjct 305 GCAGCCAAGTCGAACGGGTTGCCGTCGCCGTTGATGTCGTCGTCCATGCGGTCGTAGTCG 364 Query 49701 GTCATCAATATTCTTGGAACCGGTCGTCCGGCCAATTCGGTTACGGTCGGGTATGTAATA 49760 |||| || | || || ||||| || || || || | ||| | | | Sbjct 365 GTCAGCACAGCACGACCAATTGGCTTACCGGCGAACTCAGTCACAGACGGCCACGACAAC 424 Query 49761 GTTAACATCATACCGGTAATGTATTGTTTATCGAATTTGTTATCGGTATCTCGACCTTTC 49820 || | || ||| ||| | ||||| || |||| |||||||| | || | | Sbjct 425 GTCAGCAGCATTCCGTTGATGTAGGTCTTGTCGAGAACGTTATCGGCA----GAGGTGCC 480 Query 49821 AGT---AAT-TGCTCACCGATTAACGGGCTGTGTCGGTGAAGACGGTCAATACGTCGCAT 49876 | | ||| |||| ||||| | |||||| ||| ||||| |||||||| || | Sbjct 481 AATACGAATGTGCTTGCCGATGTCCTTGCTGTGAATGTGCAGACGATCAATACGACGATT 540 Query 49877 AGAAAAGTCTCGGGCGGCTGCCATTGTCGG---ACAGAATACCATTGTATCCATCGGGGA 49933 ||||||||||| || ||||| | || | ||| |||| | |||||||| Sbjct 541 GCTGAAGTCTCGGGCCGCCGCCATAGATGGGTTATAGACAACCA---TGTCCATCGGTTC 597 Query 49934 GACTTTTATTGAGTATGCCACTCCATTGATAATTATCGCGTCGGTTTTACCTGACTGTGC 49993 | | | | ||| |||| || || | | || ||||||||||| || ||||| || Sbjct 598 GCATGTGACATGGTAGCCCACGCCGTTTACGACGATAGCGTCGGTTTTGCCCGACTGCGC 657 Query 49994 CGGGCC 49999 ||| || Sbjct 658 CGGCCC 663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187221197858080