Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_029045.1 Length=60216 Score E Sequences producing significant alignments: (Bits) Value seq1069 161 4e-35 seq1047 143 1e-29 seq1064 111 6e-20 >seq1069 Length=856 Score = 161 bits (178), Expect = 4e-35 Identities = 272/392 (69%), Gaps = 4/392 (1%) Strand=Plus/Plus Query 14386 CAGACTCGCGGTATCAGCGAAATGGTCGCAGCGTTAAAGCAGATGAAGATGACCCGAAAC 14445 |||||||| || |||||||| ||||| | | | | |||||||| ||||||||| || Sbjct 353 CAGACTCGTGGCATCAGCGACATGGTGTCCGTGCTGAAGCAGATCAAGATGACCAAGAAT 412 Query 14446 TTTCAGGAAGTCACACTGCAAAACGCCATCGTCAACGCGACCTACGCGGCGGCCATTGAA 14505 || ||||| || || |||| ||||| | || ||||| | || || || ||| | ||| Sbjct 413 TTCCAGGACGTGACGTTGCAGAACGCGGTGGTAAACGCCTCGTATGCCGCCGCCCTGGAA 472 Query 14506 TCCGAATTGCCGTCTGACGTGGTCTTCAATCAGATGGGTATGGGGCAGACGCCTTTCGGC 14565 || ||||||||| | || |||| | ||||||| || ||||| ||||||| Sbjct 473 TCGGAATTGCCGGCCGATATGGTTGCGGCTGCGATGGGTCAAGGTCAGACCACTTTCGGT 532 Query 14566 GACAT--CCTGAAAACCTACATGGGGAGTCTGGCCGAGTACATCGCCGGATCGAAAAACA 14623 | | | ||| | ||||||| || ||||| ||||||| | | | || Sbjct 533 GCCGTGGCCTACGA--CTACATGTCGATGCTGGCTCAGTACATGGGTGCTGCCGGCGCCA 590 Query 14624 TCGCAATCGACGGGGCGAAAATCCCGCACCTGTTCCCCGGTACGAAACTGAAAATGCAGC 14683 | ||| || || || || |||||||| ||||||||| ||||| ||| ||||||| Sbjct 591 TTCAAATTGATGGTGCCAAGATCCCGCAGCTGTTCCCCAACACGAAGCTGCGCATGCAGC 650 Query 14684 CCGCAGGAACGCCGGGCGGAGTCGGAACCGATTATGAAGAATCGTTGCTCAGGAACATCG 14743 || || || || || || || ||||| || |||||||||||||| | |||| | Sbjct 651 CCATGGGGACTCCCGGTGGTGTTGGAACGCCTTTCGAAGAATCGTTGCTGCGCTACATTG 710 Query 14744 CCGCATCACTCGGCCTTTCGTACGAGCAGTTC 14775 ||||| || ||||| || |||||||||||| Sbjct 711 CCGCAGGCCTGGGCCTGTCCTACGAGCAGTTC 742 >seq1047 Length=3112 Score = 143 bits (158), Expect = 1e-29 Identities = 246/352 (70%), Gaps = 9/352 (3%) Strand=Plus/Minus Query 11667 GCCGACAACAAATTCGACAAACACTACGTTACCGGGATCATCCTGACGTTGAGTTACCCG 11726 ||||| ||| ||||||| |||| | | ||| || | ||||||||| | ||| Sbjct 471 GCCGATAACGTTCTCGACAAGACCTACATCAACGGAATGCTGCTGACGTTGTCGTGGCCG 412 Query 11727 TCTGTGACCGAACTGGCGGGCCGTCCGGTTGGCCGAATTATCATCACCGACTACGACCGT 11786 |||||||| || | || || || |||| || | | | |||||||||||||| Sbjct 411 TCTGTGACTGAGTTCGCCGGTAAGCCAATTGGTCGTGCTGTGCTGACCGACTACGACCGC 352 Query 11787 ATCGACGACGACATCGGCGGCGACGGTAACGCCTTCGACCTCGCATCAAA-CGTACGACG 11845 || |||||||||||| ||||||||| ||| | |||||| | || |||| || || || Sbjct 351 ATGGACGACGACATCAACGGCGACGGCAACCCGTTCGACTTGGCTGCAAAGCGGACCACC 292 Query 11846 ACCTTCGGGTCGTTTGCCATG-TGTGCGGCCGAGTCCTCGCCATCACGTCCGATTAAAGA 11904 || ||||| ||||| ||| || | || ||||| ||||| || || || ||| || Sbjct 291 ACGTTCGGCAGCTTTGCAATGACGTTC-GCGGAGTCGTCGCCGTCTCGACCCATTCTTGA 233 Query 11905 CCCGAACTGGATTAAGCGT---ACGCCACACGAAGCCCCACCATGCGACGGTATTGTCGG 11961 ||||| ||||| |||| || | ||||| || || ||| | || ||| ||| Sbjct 232 TCCGAAGTGGAT---GCGTTCGTCGGCGCACGAGGCGCCGCCAACCACTGGCATTCTCGC 176 Query 11962 GTTATACAACCGTGGCGACCGCCGACGCTGGAAATGGCCGTGTCCGCACTGC 12013 | | || |||||||| || || || |||||| | ||||| || ||||||||| Sbjct 175 GCTCTATAACCGTGGGGATCGTCGCCGCTGGTATTGGCCCTGCCCGCACTGC 124 >seq1064 Length=1149 Score = 111 bits (122), Expect = 6e-20 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 15003 TGGATCGGCGCGAGTCGCGGCCAGATCGACGAGAAGAAAGAAACCGAAGCCGCTATCCTT 15062 ||||||||||| | || ||||||||||||||| ||| |||||| | | ||||| | Sbjct 89 TGGATCGGCGCCGGCCGTGGCCAGATCGACGAGTTGAAGGAAACCCAGTCGGCTATGATG 148 Query 15063 CGCATCAAGAATGGTCTGTCAACGTACGAAGCAGAAATCGCCCGCCTCGGTGGAGACTTC 15122 ||||||||| || ||||| || | |||| ||| ||| || || || | ||| ||| Sbjct 149 CGCATCAAGTCGGGCCTGTCTACCTTCGAAAAGGAATGCGCACGACTGGGCGAAGATTTC 208 Query 15123 CGCGAAGTGTTCAAACAGCGCGCCCGCGAAGAAGGCATCATCAAAGAGTTGGGCCT 15178 ||||| | |||||||| || |||||||| |||| ||| |||| ||||||| Sbjct 209 CGCGAGATCTTCAAACAACGTCAGCGCGAAGATCGCATGATCCAAGAAATGGGCCT 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192565072207280