Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1452 122 8e-23 >seq1452 Length=168077 Score = 122 bits (134), Expect = 8e-23 Identities = 262/383 (68%), Gaps = 14/383 (4%) Strand=Plus/Plus Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806 |||||||||| || || |||| || ||| ||||| || ||||| |||| | || | Sbjct 36524 TGTGGCACGGCGGCAGGACCATGAGCTTGAGGTCCTTGGGATTCCATGCGCTGAGGACCA 36583 Query 6807 TCCTTCTGTCATCAGGGTTCCGCTTCAAGGTG-TCGATCACGTACT--GCA-GCTGGTCC 6862 | | | ||| | ||||| | | | || | | | |||| || ||| ||||||| Sbjct 36584 TGCGACGGTCGTACGGGTT--GGTGC--GGAGCTTGTGCACGACCTCAGCAAGCTGGTCG 36639 Query 6863 GCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCAC 6922 | ||||| |||| ||||| || | || | ||||| || |||||||| | |||| Sbjct 36640 ACGCCCTGACCCGTGTAGTCGGCGTGGCAGTCGGTGTACTCGGCGCCAAAGTGCCGCCAC 36699 Query 6923 TGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCC 6982 || || |||||||| ||||||| ||||||| |||| ||| | | ||| || |||| Sbjct 36700 TGAAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGATGCTGCAGGCCCAGCCCGTCC 36759 Query 6983 AGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACG---AGAGCTCC 7039 || || || || |||| ||||||||||||| | |||| | | || || | | Sbjct 36760 AGGAACTCGCGGCTGCCGTTGCCGTCCCAGATCTTGA-CCCCGGCGTCGCTCAGGGGT-- 36816 Query 7040 TTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTAC 7099 |||| ||| || ||| |||||||||||| ||||| || ||| || | || | Sbjct 36817 TTGGCCGACGTCGCGCCCGACACGAACCACAGGAGCTCGAGGATGACGGCCCGCGAGAAG 36876 Query 7100 ACACGTTTCGTCGTCAGCAGCGG 7122 || || ||||| ||||||||||| Sbjct 36877 ACGCGCTTCGTTGTCAGCAGCGG 36899 Score = 122 bits (134), Expect = 8e-23 Identities = 262/383 (68%), Gaps = 14/383 (4%) Strand=Plus/Minus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 ||||||||||| ||||| || || | || | || ||| || ||||| ||||||||| Sbjct 36899 CCGCTGCTGACAACGAAGCGCGTCTTCTCGCGGGCCGTCATCCTCGAGCTCCTGTGGTTC 36840 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCT---CGTCCCGGGGGGTGAAGATCTGGGAC 34339 ||| ||| || ||| |||| | | || || | | |||| | |||||||||||| Sbjct 36839 GTGTCGGGCGCGACGTCGGCCAA--ACCCCTGAGCGACGCCGGGG-TCAAGATCTGGGAC 36783 Query 34340 GCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGAC 34399 | |||| || || || |||||| || ||| | | ||| |||| ||||||| Sbjct 36782 GGCAACGGCAGCCGCGAGTTCCTGGACGGGCTGGGCCTGCAGCATCGCGAGGTGGGCGAC 36723 Query 34400 TTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAA 34459 ||||||| |||||||| || |||||| | |||||||| || ||||| | || | Sbjct 36722 CTGGGCCCCGTCTACGGCTTTCAGTGGCGGCACTTTGGCGCCGAGTACACCGACTGCCAC 36663 Query 34460 GCGGACTATTCGGGACAGGGAGCGGACCAGC-TGC--AGTACGTGATCGA-CACCTTGAA 34515 || ||||| |||| ||||| | ||||||| ||| || |||| | | | || | | Sbjct 36662 GCCGACTACACGGGTCAGGGCGTCGACCAGCTTGCTGAGGTCGTGCACAAGCTCC--GCA 36605 Query 34516 GCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCT 34575 | ||||| | ||| | | || || | |||| ||||| || ||||| ||| || Sbjct 36604 CC--AACCCGTACGACCGTCGCATGGTCCTCAGCGCATGGAATCCCAAGGACCTCAAGCT 36547 Query 34576 GATGGCGCTCCCCCCGTGCCACA 34598 |||| || || |||||||||| Sbjct 36546 CATGGTCCTGCCGCCGTGCCACA 36524 Score = 100 bits (110), Expect = 3e-16 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 6506 GGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAG 6565 || ||||| | ||||| || | |||||| ||||||| |||| ||||| |||| Sbjct 36202 GGAAACGGCCTTGGCTCGCGCTCCAGCTGCGTCCGGAGTGCGTCGACGTGGTCGGCGTAG 36261 Query 6566 ATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACATGAG 6623 | ||||| || |||| |||| || |||| ||| || || | ||| | | | Sbjct 36262 ACGTGCGCGTCGCCCATGACGT--GCGTCAGCGACCCGGGCACAAGACCCGTTGCGCGCG 36319 Query 6624 CGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGT 6683 ||||||||| ||| | ||| ||||| || ||||| ||||| ||||| || | ||||||| Sbjct 36320 CGATCATGTGCGTCAACAGCGCGTAGCTGGCAATATTGAAGGGCACGCCCAGGCCCATGT 36379 Query 6684 CTCCCGATCGTTGATAGAGCTGGCAG 6709 | | ||| || || |||||||||||| Sbjct 36380 CGCACGACCGCTGGTAGAGCTGGCAG 36405 Score = 100 bits (110), Expect = 3e-16 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || ||| | |||||||| | || ||||| ||||| ||||| || Sbjct 36405 CTGCCAGCTCTACCAGCGGTCGTGCGACATGGGCCTGGGCGTGCCCTTCAATATTGCCAG 36346 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 ||||| ||| | ||| |||||||||| | | ||| | || || ||| |||| Sbjct 36345 CTACGCGCTGTTGACGCACATGATCGCGCGCGCAACGGGTCTTGTGCCCGGGTCGCTGAC 36286 Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813 || |||| |||| || ||||| ||||| ||||| |||| ||||||| ||| Sbjct 36285 GC--ACGTCATGGGCGACGCGCACGTCTACGCCGACCACGTCGACGCACTCCGGACGCAG 36228 Query 34814 CTGCAACGAGAGCCCCGACCGTTCCC 34839 ||| | || ||||| | ||||| || Sbjct 36227 CTGGAGCGCGAGCCAAGGCCGTTTCC 36202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448251305505600