Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1909 105 5e-18 >seq1909 Length=49172 Score = 105 bits (116), Expect = 5e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| |||||||||||||| || ||||| ||||| || || || ||| || Sbjct 40899 ATGCAGATTTTCGTCAAAACCCTCACGGGTAAGACGATTACTCTGGAGGTCGAGTCCTCG 40840 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || || ||||| || ||| | || || || || Sbjct 40839 GACACCATCGACAATGTGAAGTC-GAAGATCCAAGACAAGGAGGGTATTCCCCCGGACCA 40781 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || || || ||||| || || || |||| || ||| | ||| ||||| Sbjct 40780 ACAACGTCTCATTTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACTCTTTCCGACTACAA 40721 Query 23790 CATACAAAAAGA 23801 ||| || || || Sbjct 40720 CATTCAGAAGGA 40709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338001443405840