Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1909 158 3e-33 seq46 129 1e-24 seq1147 118 3e-21 seq1536 116 9e-21 >seq1909 Length=49172 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || ||||| | ||||| |||| ||| || | |||||| Sbjct 40460 AGGACCAGGTGCAGCGTAGACTCCTTTTGAATGTTGTAGTCGGACAACGTGCGCCCATCC 40519 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| |||||||| || | ||| |||||||| || || || |||||||||||| Sbjct 40520 TCCAACTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGGATTCCTTCCTTGTCT 40579 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| || || ||||| |||||||| | || || || |||||||| ||| Sbjct 40580 TGAATCTTGGATTTAACGTTGTCGATTGTGTCTGACGACTCTACCTCCAACGTGATGGTC 40639 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||| || | ||| | ||||| Sbjct 40640 TTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 40671 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| || ||| ||| || || | ||||| |||| | ||| | || || Sbjct 40688 AGGACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCGTCC 40747 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||| || || ||||||||||| || |||||||| ||||||||| Sbjct 40748 TCAAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCCGGGGGAATACCCTCCTTGTCT 40807 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||||| |||| || || || | || |||||| Sbjct 40808 TGGATCTTCGACTTCACATTGTCGATGGTGTCCGAGGACTCGACCTCCAGAGTAATCGTC 40867 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| | ||||| | ||| | ||||| Sbjct 40868 TTACCCGTGAGGGTTTTGACGAAAATCTGCAT 40899 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || ||||| || ||||| || || || |||| |||||| || | |||||| Sbjct 40222 ACGAAGACGAAGCACAAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAAAGT 40281 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| | || |||||||| ||||||||||| Sbjct 40282 CCGGCCATCCTCCAGCTGCTTACCCGCGAAGATCAAGCGCTGTTGGTCAGGCGGAATACC 40341 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| ||||| || || ||||| ||||| || | ||| || || | Sbjct 40342 CTCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATCGTGTCGGACGATTCAACCTCGAG 40401 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || ||||| || | ||| || | ||| | |||||| Sbjct 40402 TGTAATTGTTTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 40443 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||||||||| || || || | ||||| |||| | ||| | ||||| Sbjct 40916 AGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGGCCATCC 40975 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || || ||||| || || ||||||||||| ||||| || |||||||| Sbjct 40976 TCAAGTTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCGGGAGGAATGCCCTCCTTGTCC 41035 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || |||||||| || | ||||| || | ||||| ||| Sbjct 41036 TGAATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTC 41095 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 41096 TTGCCAGT 41103 >seq46 Length=8609 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| | ||| | || || || |||||||| |||||||||||| Sbjct 2782 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATA 2841 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || |||||||| || || || || |||||||| |||||||| ||||||| ||| Sbjct 2842 AGACGCTGTTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 2901 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 || ||||| |||| || || || | ||||| |||||||| |||| ||| || | ||| Sbjct 2902 ATCGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 2960 >seq1147 Length=3654 Score = 118 bits (130), Expect = 3e-21 Identities = 192/274 (70%), Gaps = 7/274 (3%) Strand=Plus/Minus Query 7447 TATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAGG 7506 ||||||||||||| | |||||||| | |||||||| ||||| | | || | Sbjct 2295 TATTTAATATTTGCTCTATTTTCTGGGTTATTAGGTACTGCGTTTTCGGTCCTAATTCGA 2236 Query 7507 TTAGAATTAGCTGCTCC--GGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACG 7564 | || ||| || || |||| | ||||| || | ||| || || || || Sbjct 2235 ATGGAGTTAAGTGGACCAGGGGTAC---AATATATAGCAG--ATAATCAGCTGTATAATA 2181 Query 7565 TTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAG 7624 ||| || || || || || | | |||||||| ||| | |||||||||| | | |||| Sbjct 2180 GTATAATAACAGCTCACGCTATATTAATGATTTTTTTTATGGTTATGCCGGCTTTAATAG 2121 Query 7625 GCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAA 7684 | ||||| || |||| || | ||||||||||| || | ||||||||||| ||||| | Sbjct 2120 GTGGTTTTGGTAATTTCTTAATGCCTTTAATGATAGGAGGACCTGATATGGCATTTCCTA 2061 Query 7685 GGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718 | || || ||||| |||||||||||| |||| || Sbjct 2060 GACTAAATAATATTAGTTTTTGATTATTACCACC 2027 >seq1536 Length=70269 Score = 116 bits (128), Expect = 9e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| ||| || || |||| ||||| |||| || || Sbjct 29035 ACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGT 29094 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || |||||||| || || ||||| | || || ||||| || || ||||| Sbjct 29095 CCTGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACC 29154 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| |||||||| || | ||||| || | Sbjct 29155 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCGCTCGACTCCACCTCAAG 29214 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||| | || || | ||| | ||||| Sbjct 29215 GGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 29256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192500946974120